Metrics for Gerstein Lab Publications

Total papers: 592

(Last updated Wed Nov 20 14:49:51 2019)



Preprint (13)

PS Emani, J Warrell, AvAnticevic, S Bekiranov, M Gandal, MJ McConnell, G Sapiro, A Aspuru-Guzik, J Baker, M Bastiani, P McClure, J Murray, SN Sotiropoulos, J Taylor, G Senthil, T Lehner, MB Gerstein, AW Harrow (2019). arXiv.
G Gursoy, F Navarro, M Gerstein (2019). bioRxiv.
J Leng, CJF Cameron, S Oh, E Khurana, JP Noonan, MB Gerstein (2019). bioRxiv.
J Warrell, M Gerstein (2019). bioRxiv.
S Kumar, A Harmanci, J Vytheeswaran, M Gerstein (2019). bioRxiv.
J Zhang*, D Lee*, V Dhiman*, P Jiang*, J Xu*, P McGillivray*, H Yang*, J Liu, W Meyerson, D Clarke, M Gu, S Li, S Lou, J Xu, L Lochovsky, M Ung, L Ma, S Yu, Q Cao, A Harmanci, K Yan, A Sethi, G Gursoy, MR Schoenberg, J Rozowsky, J Warrell, P Emani, YT Yang, T Galeev, X Kong, S Liu, X Li, J Krishnan, Y Feng, JC Rivera-Mulia, J Adrian, JR Broach, M Bolt, J Moran, D Fitzgerald, V Dileep, T Liu, S Mei, T Sasaki, C Trevilla-Garcia, S Wang, Y Wang, C Zang, D Wang, R Klein, M Snyder, DM Gilbert, K Yip, C Cheng, F Yue, XS Liu, K White, M Gerstein (2019). bioRxiv.
D Lee, M Shi, J Moran, M Wall, J Zhang, J Liu, D Fitzgerald, Y Kyono, L Ma, K White, M Gerstein (2019). bioRxiv.
S Lou, T Li, D Spakowicz, GL Chupp, M Gerstein (2019). bioRxiv.
J Zhang, J Liu, D Lee, J Feng, L Lochovsky, S Lou, MR Schoenberg, M Gerstein (2018). bioRxiv.
A Sethi, M Gu, E Gumusgoz, L Chan, K Yan, J Rozowsky, I Barozzi, V Afzal, J Akiyama, I Plajzer-Frick, C Yan, C Pickle, M Kato, T Garvin, Q Pham, A Harrington, B Mannion, E Lee, Y Fukuda-Yuzawa, A Visel, DE Dickel, K Yip, R Sutton, LA Pennacchio, M Gerstein (2018). bioRxiv.
S Li, FW Crawford, MB Gerstein (2018). bioRxiv.
S Kumar*, J Warrell*, S Li#, PD McGillivray#, W Meyerson#, L Salichos#, A Harmanci, A Martinez-Fundichely, CWY Chan, MM Nielsen, L Lochovsky, Y Zhang, X Li, JS Pedersen, C Herrmann, G Getz, E Khurana, MB Gerstein, PCAWG-ICGC/TCGA (2018). bioRxiv.
E Rheinbay, MM Nielsen, F Abascal, G Tiao, H Hornshøj, JM Hess, RI Pedersen, L Feuerbach, R Sabarinathan, T Madsen, J Kim, L Mularoni, S Shuai, A Lanzós, C Herrmann, YE Maruvka, C Shen, SB Amin, J Bertl, P Dhingra, K Diamanti, A Gonzalez-Perez, Q Guo, NJ Haradhvala, K Isaev, M Juul, J Komorowski, S Kumar, D Lee, L Lochovsky, EM Liu, O Pich, D Tamborero, HM Umer, L Uusküla-Reimand, C Wadelius, L Wadi, J Zhang, KA Boroevich, J Carlevaro-Fita, D Chakravarty, CWY Chan, NA Fonseca, MP Hamilton, C Hong, A Kahles, Y Kim, K Lehmann, TA Johnson, A Kahraman, K Park, G Saksena, L Sieverling, NA Sinnott-Armstrong, PJ Campbell, A Hobolth, M Kellis, MS Lawrence, B Raphael, MA Rubin, C Sander, L Stein, J Stuart, T Tsunoda, DA Wheeler, R Johnson, J Reimand, MB Gerstein, E Khurana, N López-Bigas, I Martincorena, JS Pedersen, G Getz (2017). bioRxiv.



2019 (17)

M Koupenova, E Mick, HA Corkrey, A Singh, SE Tanriverdi, O Vitseva, D Levy, AM Keeler, M Ezzaty Mirhashemi, MK ElMallah, M Gerstein, J Rozowsky, K Tanriverdi, JE Freedman (2019). iScience 19: 916-926.
S Lou, KA Cotter, T Li, J Liang, H Mohsen, J Liu, J Zhang, S Cohen, J Xu, H Yu, MA Rubin, M Gerstein (2019). PLoS Genet 15: e1007860.
S Kumar, D Clarke, MB Gerstein (2019). Proc Natl Acad Sci U S A 116: 18962-18970.
D Greenbaum, M Gerstein (2019). Science 365 (6455):764.
FC Navarro, J Hoops, L Bellfy, E Cerveira, Q Zhu, C Zhang, C Lee, MB Gerstein (2019). PLoS Comput Biol 15: e1007293.
D Polioudakis, L de la Torre-Ubieta, J Langerman, AG Elkins, X Shi, JL Stein, CK Vuong, S Nichterwitz, M Gevorgian, CK Opland, D Lu, W Connell, EK Ruzzo, JK Lowe, T Hadzic, FI Hinz, S Sabri, WE Lowry, MB Gerstein, K Plath, DH Geschwind (2019). Neuron 103: 785-801e8.
B Wang, C Yan, S Lou, P Emani, B Li, M Xu, X Kong, W Meyerson, YT Yang, D Lee, M Gerstein (2019). Structure 27: 1469-1481e3.
FCP Navarro, H Mohsen, C Yan, S Li, M Gu, W Meyerson, M Gerstein (2019). Genome Biol 20: 109.
MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, EJ Gardner, OL Rodriguez, L Guo, RL Collins, X Fan, J Wen, RE Handsaker, S Fairley, ZN Kronenberg, X Kong, F Hormozdiari, D Lee, AM Wenger, AR Hastie, D Antaki, T Anantharaman, PA Audano, H Brand, S Cantsilieris, H Cao, E Cerveira, C Chen, X Chen, CS Chin, Z Chong, NT Chuang, CC Lambert, DM Church, L Clarke, A Farrell, J Flores, T Galeev, DU Gorkin, M Gujral, V Guryev, WH Heaton, J Korlach, S Kumar, JY Kwon, ET Lam, JE Lee, J Lee, WP Lee, SP Lee, S Li, P Marks, K Viaud-Martinez, S Meiers, KM Munson, FCP Navarro, BJ Nelson, C Nodzak, A Noor, S Kyriazopoulou-Panagiotopoulou, AWC Pang, Y Qiu, G Rosanio, M Ryan, A Stutz, DCJ Spierings, A Ward, AE Welch, M Xiao, W Xu, C Zhang, Q Zhu, X Zheng-Bradley, E Lowy, S Yakneen, S McCarroll, G Jun, L Ding, CL Koh, B Ren, P Flicek, K Chen, MB Gerstein, PY Kwok, PM Lansdorp, GT Marth, J Sebat, X Shi, A Bashir, K Ye, SE Devine, ME Talkowski, RE Mills, T Marschall, JO Korbel, EE Eichler, C Lee (2019). Nat Commun 10: 1784.
J Rozowsky, RR Kitchen, JJ Park, TR Galeev, J Diao, J Warrell, W Thistlethwaite, SL Subramanian, A Milosavljevic, M Gerstein (2019). Cell Syst 8: 352-357e3.
OD Murillo, W Thistlethwaite, J Rozowsky, SL Subramanian, R Lucero, N Shah, AR Jackson, S Srinivasan, A Chung, CD Laurent, RR Kitchen, T Galeev, J Warrell, JA Diao, JA Welsh, K Hanspers, A Riutta, S Burgstaller-Muehlbacher, RV Shah, A Yeri, LM Jenkins, ME Ahsen, C Cordon-Cardo, N Dogra, SM Gifford, JT Smith, G Stolovitzky, AK Tewari, BH Wunsch, KK Yadav, KM Danielson, J Filant, C Moeller, P Nejad, A Paul, B Simonson, DK Wong, X Zhang, L Balaj, R Gandhi, AK Sood, RP Alexander, L Wang, C Wu, DTW Wong, DJ Galas, K Van Keuren-Jensen, T Patel, JC Jones, S Das, KH Cheung, AR Pico, AI Su, RL Raffai, LC Laurent, ME Roth, MB Gerstein, A Milosavljevic (2019). Cell 177: 463-477e15.
S Das, Extracellular RNA Communication Consortium, KM Ansel, M Bitzer, XO Breakefield, A Charest, DJ Galas, MB Gerstein, M Gupta, A Milosavljevic, MT McManus, T Patel, RL Raffai, J Rozowsky, ME Roth, JA Saugstad, K Van Keuren-Jensen, AM Weaver, LC Laurent (2019). Cell 177: 231-242.
EY Ho, Q Cao, M Gu, RW Chan, Q Wu, M Gerstein, KY Yip (2019). Brief Bioinform.
GG Yardmc, H Ozadam, MEG Sauria, O Ursu, KK Yan, T Yang, A Chakraborty, A Kaul, BR Lajoie, F Song, Y Zhan, F Ay, M Gerstein, A Kundaje, Q Li, J Taylor, F Yue, J Dekker, WS Noble (2019). Genome Biol 20: 57.
A Moro, TP Driscoll, LC Boraas, W Armero, DM Kasper, N Baeyens, C Jouy, V Mallikarjun, J Swift, SJ Ahn, D Lee, J Zhang, M Gu, M Gerstein, M Schwartz, S Nicoli (2019). Nat Cell Biol 21: 348-358.
JE Posey, AH O'Donnell-Luria, JX Chong, T Harel, SN Jhangiani, ZH Coban Akdemir, S Buyske, D Pehlivan, CMB Carvalho, S Baxter, N Sobreira, P Liu, N Wu, JA Rosenfeld, S Kumar, D Avramopoulos, JJ White, KF Doheny, PD Witmer, C Boehm, VR Sutton, DM Muzny, E Boerwinkle, M Gunel, DA Nickerson, S Mane, DG MacArthur, RA Gibbs, A Hamosh, RP Lifton, TC Matise, HL Rehm, M Gerstein, MJ Bamshad, D Valle, JR Lupski, Centers for Mendelian Genomics (2019). Genet Med 21: 798-812.
S Li, MB Gerstein (2019). N Engl J Med 380: 200.



2018 (23)

PsychENCODE Consortium (2018). Science 362: 1262-1263.
D Wang, S Liu, J Warrell, H Won, X Shi, FCP Navarro, D Clarke, M Gu, P Emani, YT Yang, M Xu, MJ Gandal, S Lou, J Zhang, JJ Park, C Yan, SK Rhie, K Manakongtreecheep, H Zhou, A Nathan, M Peters, E Mattei, D Fitzgerald, T Brunetti, J Moore, Y Jiang, K Girdhar, GE Hoffman, S Kalayci, ZH Gumus, GE Crawford, PsychENCODE Consortium, P Roussos, S Akbarian, AE Jaffe, KP White, Z Weng, N Sestan, DH Geschwind, JA Knowles, MB Gerstein (2018). Science 362.
MJ Gandal, P Zhang, E Hadjimichael, RL Walker, C Chen, S Liu, H Won, H van Bakel, M Varghese, Y Wang, AW Shieh, J Haney, S Parhami, J Belmont, M Kim, P Moran Losada, Z Khan, J Mleczko, Y Xia, R Dai, D Wang, YT Yang, M Xu, K Fish, PR Hof, J Warrell, D Fitzgerald, K White, AE Jaffe, PsychENCODE Consortium, MA Peters, M Gerstein, C Liu, LM Iakoucheva, D Pinto, DH Geschwind (2018). Science 362.
M Li, G Santpere, Y Imamura Kawasawa, OV Evgrafov, FO Gulden, S Pochareddy, SM Sunkin, Z Li, Y Shin, Y Zhu, AMM Sousa, DM Werling, RR Kitchen, HJ Kang, M Pletikos, J Choi, S Muchnik, X Xu, D Wang, B Lorente-Galdos, S Liu, P Giusti-Rodriguez, H Won, CA de Leeuw, AF Pardinas, BrainSpan Consortium, PsychENCODE Consortium, PsychENCODE Developmental Subgroup, M Hu, F Jin, Y Li, MJ Owen, MC O'Donovan, JTR Walters, D Posthuma, MA Reimers, P Levitt, DR Weinberger, TM Hyde, JE Kleinman, DH Geschwind, MJ Hawrylycz, MW State, SJ Sanders, PF Sullivan, MB Gerstein, ES Lein, JA Knowles, N Sestan (2018). Science 362.
A Amiri, G Coppola, S Scuderi, F Wu, T Roychowdhury, F Liu, S Pochareddy, Y Shin, A Safi, L Song, Y Zhu, AMM Sousa, PsychENCODE Consortium, M Gerstein, GE Crawford, N Sestan, A Abyzov, FM Vaccarino (2018). Science 362.
X Kong, M Gerstein (2018). Current Opinion in Systems Biology 11:117-122.
W Shi, CKY Ng, RS Lim, T Jiang, S Kumar, X Li, VB Wali, S Piscuoglio, MB Gerstein, AB Chagpar, B Weigelt, L Pusztai, JS Reis-Filho, C Hatzis (2018). Cell Rep 25: 1446-1457.
A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, JM Mudge, C Sisu, J Wright, J Armstrong, I Barnes, A Berry, A Bignell, S Carbonell Sala, J Chrast, F Cunningham, T Di Domenico, S Donaldson, IT Fiddes, C Garcia Giron, JM Gonzalez, T Grego, M Hardy, T Hourlier, T Hunt, OG Izuogu, J Lagarde, FJ Martin, L Martinez, S Mohanan, P Muir, FCP Navarro, A Parker, B Pei, F Pozo, M Ruffier, BM Schmitt, E Stapleton, MM Suner, I Sycheva, B Uszczynska-Ratajczak, J Xu, A Yates, D Zerbino, Y Zhang, B Aken, JS Choudhary, M Gerstein, R Guigo, TJP Hubbard, M Kellis, B Paten, A Reymond, ML Tress, P Flicek (2018). Nucleic Acids Res 47: D766-D773.
J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, W Chow, J Collins, S Collins, A Czechanski, P Danecek, M Diekhans, DD Dolle, M Dunn, R Durbin, D Earl, A Ferguson-Smith, P Flicek, J Flint, A Frankish, B Fu, M Gerstein, J Gilbert, L Goodstadt, J Harrow, K Howe, X Ibarra-Soria, M Kolmogorov, CJ Lelliott, DW Logan, J Loveland, CE Mathews, R Mott, P Muir, S Nachtweide, FCP Navarro, DT Odom, N Park, S Pelan, SK Pham, M Quail, L Reinholdt, L Romoth, L Shirley, C Sisu, M Sjoberg-Herrera, M Stanke, C Steward, M Thomas, G Threadgold, D Thybert, J Torrance, K Wong, J Wood, B Yalcin, F Yang, DJ Adams, B Paten, TM Keane (2018). Nat Genet 50: 1574-1583.
D Greenbaum, M Gerstein (2018). Science 362 (6415):648.
D Greenbaum, M Gerstein (2018). Cell 174:1043-1044.
V Onuchic, E Lurie, I Carrero, P Pawliczek, RY Patel, J Rozowsky, T Galeev, Z Huang, RC Altshuler, Z Zhang, RA Harris, C Coarfa, L Ashmore, JW Bertol, WD Fakhouri, F Yu, M Kellis, M Gerstein, A Milosavljevic (2018). Science 361.
BC Carlyle, RR Kitchen, J Zhang, RS Wilson, TT Lam, JS Rozowsky, KR Williams, N Sestan, MB Gerstein, AC Nairn (2018). J Proteome Res 17: 3431-3444.
AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, P Dehal, D Ware, F Perez, S Canon, MW Sneddon, ML Henderson, WJ Riehl, D Murphy-Olson, SY Chan, RT Kamimura, S Kumari, MM Drake, TS Brettin, EM Glass, D Chivian, D Gunter, DJ Weston, BH Allen, J Baumohl, AA Best, B Bowen, SE Brenner, CC Bun, JM Chandonia, JM Chia, R Colasanti, N Conrad, JJ Davis, BH Davison, M DeJongh, S Devoid, E Dietrich, I Dubchak, JN Edirisinghe, G Fang, JP Faria, PM Frybarger, W Gerlach, M Gerstein, A Greiner, J Gurtowski, HL Haun, F He, R Jain, MP Joachimiak, KP Keegan, S Kondo, V Kumar, ML Land, F Meyer, M Mills, PS Novichkov, T Oh, GJ Olsen, R Olson, B Parrello, S Pasternak, E Pearson, SS Poon, GA Price, S Ramakrishnan, P Ranjan, PC Ronald, MC Schatz, SMD Seaver, M Shukla, RA Sutormin, MH Syed, J Thomason, NL Tintle, D Wang, F Xia, H Yoo, S Yoo, D Yu (2018). Nat Biotechnol 36: 566-569.
A Harmanci, M Gerstein (2018). Nat Commun 9: 2453.
KW Barber, P Muir, RV Szeligowski, S Rogulina, M Gerstein, JR Sampson, FJ Isaacs, J Rinehart (2018). Nat Biotechnol 36: 638-644.
P McGillivray, D Clarke, W Meyerson, J Zhang, D Lee, M Gu, S Kumar, H Zhou, MB Gerstein (2018). Annual Review of Biomedical Data Science Vol. 1.
D Thybert, M Roller, FCP Navarro, I Fiddes, I Streeter, C Feig, D Martin-Galvez, M Kolmogorov, V Janousek, W Akanni, B Aken, S Aldridge, V Chakrapani, W Chow, L Clarke, C Cummins, A Doran, M Dunn, L Goodstadt, K Howe, M Howell, AA Josselin, RC Karn, CM Laukaitis, L Jingtao, F Martin, M Muffato, S Nachtweide, MA Quail, C Sisu, M Stanke, K Stefflova, C Van Oosterhout, F Veyrunes, B Ward, F Yang, G Yazdanifar, A Zadissa, DJ Adams, A Brazma, M Gerstein, B Paten, S Pham, TM Keane, DT Odom, P Flicek (2018). Genome Res 28: 448-459.
P McGillivray, R Ault, M Pawashe, R Kitchen, S Balasubramanian, M Gerstein (2018). Nucleic Acids Res 46: 3326-3338.
T Becker, WP Lee, J Leone, Q Zhu, C Zhang, S Liu, J Sargent, K Shanker, A Mil-Homens, E Cerveira, M Ryan, J Cha, FCP Navarro, T Galeev, M Gerstein, RE Mills, DG Shin, C Lee, A Malhotra (2018). Genome Biol 19: 38.
MJ Gandal, JR Haney, NN Parikshak, V Leppa, G Ramaswami, C Hartl, AJ Schork, V Appadurai, A Buil, TM Werge, C Liu, KP White, CommonMind Consortium, PsychENCODE Consortium, iPSYCH-BROAD Working Group, S Horvath, DH Geschwind (2018). Science 359: 693-697.
MB Gerstein, FCP Navarro (2018). Nature 553: 405.
BD Piening, W Zhou, K Contrepois, H Rost, GJ Gu Urban, T Mishra, BM Hanson, EJ Bautista, S Leopold, CY Yeh, D Spakowicz, I Banerjee, C Chen, K Kukurba, D Perelman, C Craig, E Colbert, D Salins, S Rego, S Lee, C Zhang, J Wheeler, MR Sailani, L Liang, C Abbott, M Gerstein, A Mardinoglu, U Smith, DL Rubin, S Pitteri, E Sodergren, TL McLaughlin, GM Weinstock, MP Snyder (2018). Cell Syst 6: 157-170e8.



2017 (20)

KE Kaczor-Urbanowicz, Y Kim, F Li, T Galeev, RR Kitchen, M Gerstein, K Koyano, SH Jeong, X Wang, D Elashoff, SY Kang, SM Kim, K Kim, S Kim, D Chia, X Xiao, J Rozowsky, DTW Wong (2017). Bioinformatics 34: 1-8.
MM Kudron, A Victorsen, L Gevirtzman, LW Hillier, WW Fisher, D Vafeados, M Kirkey, AS Hammonds, J Gersch, H Ammouri, ML Wall, J Moran, D Steffen, M Szynkarek, S Seabrook-Sturgis, N Jameel, M Kadaba, J Patton, R Terrell, M Corson, TJ Durham, S Park, S Samanta, M Han, J Xu, KK Yan, SE Celniker, KP White, L Ma, M Gerstein, V Reinke, RH Waterston (2017). Genetics 208: 937-949.
BC Carlyle, RR Kitchen, JE Kanyo, EZ Voss, M Pletikos, AMM Sousa, TT Lam, MB Gerstein, N Sestan, AC Nairn (2017). Nat Neurosci 20: 1787-1795.
AMM Sousa, Y Zhu, MA Raghanti, RR Kitchen, M Onorati, ATN Tebbenkamp, B Stutz, KA Meyer, M Li, YI Kawasawa, F Liu, RG Perez, M Mele, T Carvalho, M Skarica, FO Gulden, M Pletikos, A Shibata, AR Stephenson, MK Edler, JJ Ely, JD Elsworth, TL Horvath, PR Hof, TM Hyde, JE Kleinman, DR Weinberger, M Reimers, RP Lifton, SM Mane, JP Noonan, MW State, ES Lein, JA Knowles, T Marques-Bonet, CC Sherwood, MB Gerstein, N Sestan (2017). Science 358: 1027-1032.
L Lochovsky, J Zhang, M Gerstein (2017). Bioinformatics 34: 1031-1033.
Q Cao, C Anyansi, X Hu, L Xu, L Xiong, W Tang, MTS Mok, C Cheng, X Fan, M Gerstein, ASL Cheng, KY Yip (2017). Nat Genet 49: 1428-1436.
S Balasubramanian, Y Fu, M Pawashe, P McGillivray, M Jin, J Liu, KJ Karczewski, DG MacArthur, M Gerstein (2017). Nat Commun 8: 382.
KK Yan, S Lou, M Gerstein (2017). PLoS Comput Biol 13: e1005647.
SME Sahraeian, M Mohiyuddin, R Sebra, H Tilgner, PT Afshar, KF Au, N Bani Asadi, MB Gerstein, WH Wong, MP Snyder, E Schadt, HYK Lam (2017). Nat Commun 8: 59.
Y Zhang, S Li, A Abyzov, MB Gerstein (2017). PLoS Comput Biol 13: e1005567.
S Kumar, M Gerstein (2017). Nature 547: 40-41.
P Dhingra, Y Fu, M Gerstein, E Khurana (2017). Curr Protoc Bioinformatics 57: 15111-151117.
P Alves, S Liu, D Wang, M Gerstein (2017). IEEE/ACM Trans Comput Biol Bioinform 15: 926-933.
V Despic, M Dejung, M Gu, J Krishnan, J Zhang, L Herzel, K Straube, MB Gerstein, F Butter, KM Neugebauer (2017). Genome Res 27: 1184-1194.
D Greenbaum, J Rozowsky, V Stodden, M Gerstein (2017). Genome Biol 18: 64.
KK Yan, GG Yardimci, C Yan, WS Noble, M Gerstein (2017). Bioinformatics 33: 2199-2201.
S Li, BM Shuch, MB Gerstein (2017). PLoS Genet 13: e1006685.
DM Kasper, A Moro, E Ristori, A Narayanan, G Hill-Teran, E Fleming, M Moreno-Mateos, CE Vejnar, J Zhang, D Lee, M Gu, M Gerstein, A Giraldez, S Nicoli (2017). Dev Cell 40: 552-565e5.
E Mick, R Shah, K Tanriverdi, V Murthy, M Gerstein, J Rozowsky, R Kitchen, MG Larson, D Levy, JE Freedman (2017). Stroke 48: 828-834.
A Abyzov, L Tomasini, B Zhou, N Vasmatzis, G Coppola, M Amenduni, R Pattni, M Wilson, M Gerstein, S Weissman, AE Urban, FM Vaccarino (2017). Genome Res 27: 512-523.



2016 (21)

J Chen, B Wang, L Regan, M Gerstein (2016). J Mol Biol 429: 435-445.
S Kumar, D Clarke, M Gerstein (2016). Nucleic Acids Res 44: 10062-10073.
D Wang, F He, S Maslov, M Gerstein (2016). PLoS Comput Biol 12: e1005146.
D Greenbaum, M Gerstein (2016). The Scientist (30 Aug).
CC Yang, EH Andrews, MH Chen, WY Wang, JJ Chen, M Gerstein, CC Liu, C Cheng (2016). BMC Genomics 17: 632.
SW Choo, M Rayko, TK Tan, R Hari, A Komissarov, WY Wee, AA Yurchenko, S Kliver, G Tamazian, A Antunes, RK Wilson, WC Warren, KP Koepfli, P Minx, K Krasheninnikova, A Kotze, DL Dalton, E Vermaak, IC Paterson, P Dobrynin, FT Sitam, JJ Rovie-Ryan, WE Johnson, AM Yusoff, SJ Luo, KV Karuppannan, G Fang, D Zheng, MB Gerstein, L Lipovich, SJ O'Brien, GJ Wong (2016). Genome Res 26: 1312-1322.
JE Freedman, M Gerstein, E Mick, J Rozowsky, D Levy, R Kitchen, S Das, R Shah, K Danielson, L Beaulieu, FC Navarro, Y Wang, TR Galeev, A Holman, RY Kwong, V Murthy, SE Tanriverdi, M Koupenova, E Mikhalev, K Tanriverdi (2016). Nat Commun 7: 11902.
P Muir, S Li, S Lou, D Wang, DJ Spakowicz, L Salichos, J Zhang, GM Weinstock, F Isaacs, J Rozowsky, M Gerstein (2016). Genome Biol 17: 78.
R Shah, K Tanriverdi, D Levy, M Larson, M Gerstein, E Mick, J Rozowsky, R Kitchen, V Murthy, E Mikalev, JE Freedman (2016). PLoS One 11: e0153691.
JE Freedman, M Gerstein, E Mick, J Rozowsky, D Levy, R Kitchen, S Das, R Shah, K Danielson, L Beaulieu, FC Navarro, Y Wang, TR Galeev, A Holman, RY Kwong, V Murthy, SE Tanriverdi, M Koupenova-Zamor, E Mikhalev, K Tanriverdi (2016). Nat Commun 7: 11106.
KH Cheung, S Keerthikumar, P Roncaglia, SL Subramanian, ME Roth, M Samuel, S Anand, L Gangoda, S Gould, R Alexander, D Galas, MB Gerstein, AF Hill, RR Kitchen, J Lotvall, T Patel, DC Procaccini, P Quesenberry, J Rozowsky, RL Raffai, A Shypitsyna, AI Su, C Thery, K Vickers, MH Wauben, S Mathivanan, A Milosavljevic, LC Laurent (2016). J Biomed Semantics 7: 19.
J Chen, J Rozowsky, TR Galeev, A Harmanci, R Kitchen, J Bedford, A Abyzov, Y Kong, L Regan, M Gerstein (2016). Nat Commun 7: 11101.
D Clarke, A Sethi, S Li, S Kumar, RWF Chang, J Chen, M Gerstein (2016). Structure 24: 826-837.
KK Yan, D Wang, A Sethi, P Muir, R Kitchen, C Cheng, M Gerstein (2016). Cell Syst 2: 147-157.
D Greenbaum, M Gerstein (2016). Cell 165:257-258.
F He, S Yoo, D Wang, S Kumari, M Gerstein, D Ware, S Maslov (2016). Plant J 86: 472-80.
P Muir, S Li, S Lou, D Wang, DJ Spakowicz, L Salichos, J Zhang, GM Weinstock, F Isaacs, J Rozowsky, M Gerstein (2016). Genome Biol 17: 53.
D Wang, KK Yan, J Rozowsky, E Pan, M Gerstein (2016). Trends Genet 32: 251-253.
A Harmanci, M Gerstein (2016). Nat Methods 13: 251-6.
E Khurana, Y Fu, D Chakravarty, F Demichelis, MA Rubin, M Gerstein (2016). Nat Rev Genet 17: 93-108.
A Abyzov, S Li, MB Gerstein (2016). Oncotarget 7: 7370-1.



2015 (19)

S Purushotham, MR Min, CJ Kuo, M Gerstein (2015). NIPS Workshop on Machine Learning in Computational Biology.
Cancer Genome Atlas Research Network (2015). Cell 163: 1011-25.
A Sethi, D Clarke, J Chen, S Kumar, TR Galeev, L Regan, M Gerstein (2015). Curr Opin Struct Biol 35: 125-34.
PsychENCODE Consortium, S Akbarian, C Liu, JA Knowles, FM Vaccarino, PJ Farnham, GE Crawford, AE Jaffe, D Pinto, S Dracheva, DH Geschwind, J Mill, AC Nairn, A Abyzov, S Pochareddy, S Prabhakar, S Weissman, PF Sullivan, MW State, Z Weng, MA Peters, KP White, MB Gerstein, A Amiri, C Armoskus, AE Ashley-Koch, T Bae, A Beckel-Mitchener, BP Berman, GA Coetzee, G Coppola, N Francoeur, M Fromer, R Gao, K Grennan, J Herstein, DH Kavanagh, NA Ivanov, Y Jiang, RR Kitchen, A Kozlenkov, M Kundakovic, M Li, Z Li, S Liu, LM Mangravite, E Mattei, E Markenscoff-Papadimitriou, FC Navarro, N North, L Omberg, D Panchision, N Parikshak, J Poschmann, AJ Price, M Purcaro, TE Reddy, P Roussos, S Schreiner, S Scuderi, R Sebra, M Shibata, AW Shieh, M Skarica, W Sun, V Swarup, A Thomas, J Tsuji, H van Bakel, D Wang, Y Wang, K Wang, DM Werling, AJ Willsey, H Witt, H Won, CC Wong, GA Wray, EY Wu, X Xu, L Yao, G Senthil, T Lehner, P Sklar, N Sestan (2015). Nat Neurosci 18: 1707-12.
D Greenbaum, M Gerstein (2015). Cell 163:1047-1048.
Cancer Genome Atlas Research Network, WM Linehan, PT Spellman, CJ Ricketts, CJ Creighton, SS Fei, C Davis, DA Wheeler, BA Murray, L Schmidt, CD Vocke, M Peto, AA Al Mamun, E Shinbrot, A Sethi, S Brooks, WK Rathmell, AN Brooks, KA Hoadley, AG Robertson, D Brooks, R Bowlby, S Sadeghi, H Shen, DJ Weisenberger, M Bootwalla, SB Baylin, PW Laird, AD Cherniack, G Saksena, S Haake, J Li, H Liang, Y Lu, GB Mills, R Akbani, MD Leiserson, BJ Raphael, P Anur, D Bottaro, L Albiges, N Barnabas, TK Choueiri, B Czerniak, AK Godwin, AA Hakimi, TH Ho, J Hsieh, M Ittmann, WY Kim, B Krishnan, MJ Merino, KR Mills Shaw, VE Reuter, E Reznik, CS Shelley, B Shuch, S Signoretti, R Srinivasan, P Tamboli, G Thomas, S Tickoo, K Burnett, D Crain, J Gardner, K Lau, D Mallery, S Morris, JD Paulauskis, RJ Penny, C Shelton, WT Shelton, M Sherman, E Thompson, P Yena, MT Avedon, J Bowen, JM Gastier-Foster, M Gerken, KM Leraas, TM Lichtenberg, NC Ramirez, T Santos, L Wise, E Zmuda, JA Demchok, I Felau, CM Hutter, M Sheth, HJ Sofia, R Tarnuzzer, Z Wang, L Yang, JC Zenklusen, J Zhang, B Ayala, J Baboud, S Chudamani, J Liu, L Lolla, R Naresh, T Pihl, Q Sun, Y Wan, Y Wu, A Ally, M Balasundaram, S Balu, R Beroukhim, T Bodenheimer, C Buhay, YS Butterfield, R Carlsen, SL Carter, H Chao, E Chuah, A Clarke, KR Covington, M Dahdouli, N Dewal, N Dhalla, HV Doddapaneni, JA Drummond, SB Gabriel, RA Gibbs, R Guin, W Hale, A Hawes, DN Hayes, RA Holt, AP Hoyle, SR Jefferys, SJ Jones, CD Jones, D Kalra, C Kovar, L Lewis, J Li, Y Ma, MA Marra, M Mayo, S Meng, M Meyerson, PA Mieczkowski, RA Moore, D Morton, LE Mose, AJ Mungall, D Muzny, JS Parker, CM Perou, J Roach, JE Schein, SE Schumacher, Y Shi, JV Simons, P Sipahimalani, T Skelly, MG Soloway, C Sougnez, A Tam, D Tan, N Thiessen, U Veluvolu, M Wang, MD Wilkerson, T Wong, J Wu, L Xi, J Zhou, J Bedford, F Chen, Y Fu, M Gerstein, D Haussler, K Kasaian, P Lai, S Ling, A Radenbaugh, D Van Den Berg, JN Weinstein, J Zhu, M Albert, I Alexopoulou, JJ Andersen, JT Auman, J Bartlett, S Bastacky, J Bergsten, ML Blute, L Boice, RJ Bollag, J Boyd, E Castle, YB Chen, JC Cheville, E Curley, B Davies, A DeVolk, R Dhir, L Dike, J Eckman, J Engel, J Harr, R Hrebinko, M Huang, L Huelsenbeck-Dill, M Iacocca, B Jacobs, M Lobis, JK Maranchie, S McMeekin, J Myers, J Nelson, J Parfitt, A Parwani, N Petrelli, B Rabeno, S Roy, AL Salner, J Slaton, M Stanton, RH Thompson, L Thorne, K Tucker, PM Weinberger, C Winemiller, LA Zach, R Zuna (2015). N Engl J Med 374: 135-45.
1000 Genomes Project Consortium, A Auton, LD Brooks, RM Durbin, EP Garrison, HM Kang, JO Korbel, JL Marchini, S McCarthy, GA McVean, GR Abecasis (2015). Nature 526: 68-74.
PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, J Huddleston, Y Zhang, K Ye, G Jun, MH Fritz, MK Konkel, A Malhotra, AM Stutz, X Shi, FP Casale, J Chen, F Hormozdiari, G Dayama, K Chen, M Malig, MJP Chaisson, K Walter, S Meiers, S Kashin, E Garrison, A Auton, HYK Lam, XJ Mu, C Alkan, D Antaki, T Bae, E Cerveira, P Chines, Z Chong, L Clarke, E Dal, L Ding, S Emery, X Fan, M Gujral, F Kahveci, JM Kidd, Y Kong, EW Lameijer, S McCarthy, P Flicek, RA Gibbs, G Marth, CE Mason, A Menelaou, DM Muzny, BJ Nelson, A Noor, NF Parrish, M Pendleton, A Quitadamo, B Raeder, EE Schadt, M Romanovitch, A Schlattl, R Sebra, AA Shabalin, A Untergasser, JA Walker, M Wang, F Yu, C Zhang, J Zhang, X Zheng-Bradley, W Zhou, T Zichner, J Sebat, MA Batzer, SA McCarroll, 1000 Genomes Project Consortium, RE Mills, MB Gerstein, A Bashir, O Stegle, SE Devine, C Lee, EE Eichler, JO Korbel (2015). Nature 526: 75-81.
JC Mu, P Tootoonchi Afshar, M Mohiyuddin, X Chen, J Li, N Bani Asadi, MB Gerstein, WH Wong, HY Lam (2015). Sci Rep 5: 14493.
LT Fang, PT Afshar, A Chhibber, M Mohiyuddin, Y Fan, JC Mu, G Gibeling, S Barr, NB Asadi, MB Gerstein, DC Koboldt, W Wang, WH Wong, HY Lam (2015). Genome Biol 16: 197.
EE Duffy, M Rutenberg-Schoenberg, CD Stark, RR Kitchen, MB Gerstein, MD Simon (2015). Mol Cell 59: 858-66.
L Lochovsky, J Zhang, Y Fu, E Khurana, M Gerstein (2015). Nucleic Acids Res 43: 8123-34.
PP Kuksa, MR Min, R Dugar, M Gerstein (2015). Bioinformatics 31: 3600-7.
J Mariani, G Coppola, P Zhang, A Abyzov, L Provini, L Tomasini, M Amenduni, A Szekely, D Palejev, M Wilson, M Gerstein, EL Grigorenko, K Chawarska, KA Pelphrey, JR Howe, FM Vaccarino (2015). Cell 162: 375-390.
A Abyzov, S Li, DR Kim, M Mohiyuddin, AM Stutz, NF Parrish, XJ Mu, W Clark, K Chen, M Hurles, JO Korbel, HY Lam, C Lee, MB Gerstein (2015). Nat Commun 6: 7256.
D Greenbaum, M Gerstein (2015). Science 347: 956.
M Mohiyuddin, JC Mu, J Li, N Bani Asadi, MB Gerstein, A Abyzov, WH Wong, HY Lam (2015). Bioinformatics 31: 2741-4.
D Wang, KK Yan, C Sisu, C Cheng, J Rozowsky, W Meyerson, MB Gerstein (2015). PLoS Comput Biol 11: e1004132.
C Cheng, E Andrews, KK Yan, M Ung, D Wang, M Gerstein (2015). Genome Biol 16: 63.



2014 (14)

MR Min, X Ning, Y Qi, C Cheng, A Bonner, M Gerstein (2014). NIPS Workshop on Machine Learning in Computational Biology.
MR Min, X Ning, C Cheng, M Gerstein (2014). JMLR W&CP 33:614-622 (AISTATS 2014).
JC Mu, M Mohiyuddin, J Li, N Bani Asadi, MB Gerstein, A Abyzov, WH Wong, HY Lam (2014). Bioinformatics 31: 1469-71.
RR Kitchen, JS Rozowsky, MB Gerstein, AC Nairn (2014). Nat Neurosci 17: 1491-9.
A Harmanci, J Rozowsky, M Gerstein (2014). Genome Biol 15: 474.
Y Fu, Z Liu, S Lou, J Bedford, XJ Mu, KY Yip, E Khurana, M Gerstein (2014). Genome Biol 15: 480.
AP Boyle, CL Araya, C Brdlik, P Cayting, C Cheng, Y Cheng, K Gardner, LW Hillier, J Janette, L Jiang, D Kasper, T Kawli, P Kheradpour, A Kundaje, JJ Li, L Ma, W Niu, EJ Rehm, J Rozowsky, M Slattery, R Spokony, R Terrell, D Vafeados, D Wang, P Weisdepp, YC Wu, D Xie, KK Yan, EA Feingold, PJ Good, MJ Pazin, H Huang, PJ Bickel, SE Brenner, V Reinke, RH Waterston, M Gerstein, KP White, M Kellis, M Snyder (2014). Nature 512: 453-6.
MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, CA Davis, L Hillier, C Sisu, JJ Li, B Pei, AO Harmanci, MO Duff, S Djebali, RP Alexander, BH Alver, R Auerbach, K Bell, PJ Bickel, ME Boeck, NP Boley, BW Booth, L Cherbas, P Cherbas, C Di, A Dobin, J Drenkow, B Ewing, G Fang, M Fastuca, EA Feingold, A Frankish, G Gao, PJ Good, R Guigo, A Hammonds, J Harrow, RA Hoskins, C Howald, L Hu, H Huang, TJ Hubbard, C Huynh, S Jha, D Kasper, M Kato, TC Kaufman, RR Kitchen, E Ladewig, J Lagarde, E Lai, J Leng, Z Lu, M MacCoss, G May, R McWhirter, G Merrihew, DM Miller, A Mortazavi, R Murad, B Oliver, S Olson, PJ Park, MJ Pazin, N Perrimon, D Pervouchine, V Reinke, A Reymond, G Robinson, A Samsonova, GI Saunders, F Schlesinger, A Sethi, FJ Slack, WC Spencer, MH Stoiber, P Strasbourger, A Tanzer, OA Thompson, KH Wan, G Wang, H Wang, KL Watkins, J Wen, K Wen, C Xue, L Yang, K Yip, C Zaleski, Y Zhang, H Zheng, SE Brenner, BR Graveley, SE Celniker, TR Gingeras, R Waterston (2014). Nature 512: 445-8.
C Sisu, B Pei, J Leng, A Frankish, Y Zhang, S Balasubramanian, R Harte, D Wang, M Rutenberg-Schoenberg, W Clark, M Diekhans, J Rozowsky, T Hubbard, J Harrow, MB Gerstein (2014). Proc Natl Acad Sci U S A 111: 13361-6.
KK Yan, D Wang, J Rozowsky, H Zheng, C Cheng, M Gerstein (2014). Genome Biol 15: R100.
DG MacArthur, TA Manolio, DP Dimmock, HL Rehm, J Shendure, GR Abecasis, DR Adams, RB Altman, SE Antonarakis, EA Ashley, JC Barrett, LG Biesecker, DF Conrad, GM Cooper, NJ Cox, MJ Daly, MB Gerstein, DB Goldstein, JN Hirschhorn, SM Leal, LA Pennacchio, JA Stamatoyannopoulos, SR Sunyaev, D Valle, BF Voight, W Winckler, C Gunter (2014). Nature 508: 469-76.
M Kellis, B Wold, MP Snyder, BE Bernstein, A Kundaje, GK Marinov, LD Ward, E Birney, GE Crawford, J Dekker, I Dunham, LL Elnitski, PJ Farnham, EA Feingold, M Gerstein, MC Giddings, DM Gilbert, TR Gingeras, ED Green, R Guigo, T Hubbard, J Kent, JD Lieb, RM Myers, MJ Pazin, B Ren, JA Stamatoyannopoulos, Z Weng, KP White, RC Hardison (2014). Proc Natl Acad Sci U S A 111: 6131-8.
JA Miller, SL Ding, SM Sunkin, KA Smith, L Ng, A Szafer, A Ebbert, ZL Riley, JJ Royall, K Aiona, JM Arnold, C Bennet, D Bertagnolli, K Brouner, S Butler, S Caldejon, A Carey, C Cuhaciyan, RA Dalley, N Dee, TA Dolbeare, BA Facer, D Feng, TP Fliss, G Gee, J Goldy, L Gourley, BW Gregor, G Gu, RE Howard, JM Jochim, CL Kuan, C Lau, CK Lee, F Lee, TA Lemon, P Lesnar, B McMurray, N Mastan, N Mosqueda, T Naluai-Cecchini, NK Ngo, J Nyhus, A Oldre, E Olson, J Parente, PD Parker, SE Parry, A Stevens, M Pletikos, M Reding, K Roll, D Sandman, M Sarreal, S Shapouri, NV Shapovalova, EH Shen, N Sjoquist, CR Slaughterbeck, M Smith, AJ Sodt, D Williams, L Zollei, B Fischl, MB Gerstein, DH Geschwind, IA Glass, MJ Hawrylycz, RF Hevner, H Huang, AR Jones, JA Knowles, P Levitt, JW Phillips, N Sestan, P Wohnoutka, C Dang, A Bernard, JG Hohmann, ES Lein (2014). Nature 508: 199-206.
C Chen, BH Ha, AF Thevenin, HJ Lou, R Zhang, KY Yip, JR Peterson, M Gerstein, PM Kim, P Filippakopoulos, S Knapp, TJ Boggon, BE Turk (2014). Mol Cell 53: 140-7.



2013 (14)

MR Min, X Ning, C Cheng, M Gerstein (2013). NIPS Workshop on Machine Learning in Computational Biology.
T Steijger, JF Abril, PG Engstrom, F Kokocinski, RGASP Consortium, TJ Hubbard, R Guigo, J Harrow, P Bertone (2013). Nat Methods 10: 1177-84.
D Greenbaum, J Chen, M Gerstein (2013). Science 342: 560.
E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, L Lochovsky, J Chen, A Harmanci, J Das, A Abyzov, S Balasubramanian, K Beal, D Chakravarty, D Challis, Y Chen, D Clarke, L Clarke, F Cunningham, US Evani, P Flicek, R Fragoza, E Garrison, R Gibbs, ZH Gumus, J Herrero, N Kitabayashi, Y Kong, K Lage, V Liluashvili, SM Lipkin, DG MacArthur, G Marth, D Muzny, TH Pers, GRS Ritchie, JA Rosenfeld, C Sisu, X Wei, M Wilson, Y Xue, F Yu, 1000 Genomes Project Consortium, ET Dermitzakis, H Yu, MA Rubin, C Tyler-Smith, M Gerstein (2013). Science 342: 1235587.
A Abyzov, R Iskow, O Gokcumen, DW Radke, S Balasubramanian, B Pei, L Habegger, 1000 Genomes Project Consortium, C Lee, M Gerstein (2013). Genome Res 23: 2042-52.
D Greenbaum, M Gerstein (2013). The Scientist 27:26 (1 Oct.)
C Cheng, Y Fu, L Shen, M Gerstein (2013). BMC Syst Biol 7: 70.
Y Zhang, R Haraksingh, F Grubert, A Abyzov, M Gerstein, S Weissman, AE Urban (2013). Child Dev 84: 34-48.
R Kittler, J Zhou, S Hua, L Ma, Y Liu, E Pendleton, C Cheng, M Gerstein, KP White (2013). Cell Rep 3: 538-51.
H Tilgner, D Raha, L Habegger, M Mohiuddin, M Gerstein, M Snyder (2013). G3 (Bethesda) 3: 387-97.
SB Montgomery, DL Goode, E Kvikstad, CA Albers, ZD Zhang, XJ Mu, G Ananda, B Howie, KJ Karczewski, KS Smith, V Anaya, R Richardson, J Davis, 1000 Genomes Project Consortium, DG MacArthur, A Sidow, L Duret, M Gerstein, KD Makova, J Marchini, G McVean, G Lunter (2013). Genome Res 23: 749-61.
WF Doolittle, P Fraser, MB Gerstein, BR Graveley, S Henikoff, C Huttenhower, A Oshlack, CP Ponting, JL Rinn, MC Schatz, J Ule, D Weigel, GM Weinstock (2013). Genome Biol 14: 113.
KY Yip, C Cheng, M Gerstein (2013). Genome Biol 14: 205.
E Khurana, Y Fu, J Chen, M Gerstein (2013). PLoS Comput Biol 9: e1002886.



2012 (26)

PC Lin, YL Chiu, S Banerjee, K Park, JM Mosquera, E Giannopoulou, P Alves, AK Tewari, MB Gerstein, H Beltran, AM Melnick, O Elemento, F Demichelis, MA Rubin (2012). Cancer Res 73: 1232-44.
A Abyzov, J Mariani, D Palejev, Y Zhang, MS Haney, L Tomasini, AF Ferrandino, LA Rosenberg Belmaker, A Szekely, M Wilson, A Kocabas, NE Calixto, EL Grigorenko, A Huttner, K Chawarska, S Weissman, AE Urban, M Gerstein, FM Vaccarino (2012). Nature 492: 438-42.
1000 Genomes Project Consortium, GR Abecasis, A Auton, LD Brooks, MA DePristo, RM Durbin, RE Handsaker, HM Kang, GT Marth, GA McVean (2012). Nature 491: 56-65.
M Gerstein (2012). Nature 489: 208.
ENCODE Project Consortium (2012). Nature 489: 57-74.
MB Gerstein, A Kundaje, M Hariharan, SG Landt, KK Yan, C Cheng, XJ Mu, E Khurana, J Rozowsky, R Alexander, R Min, P Alves, A Abyzov, N Addleman, N Bhardwaj, AP Boyle, P Cayting, A Charos, DZ Chen, Y Cheng, D Clarke, C Eastman, G Euskirchen, S Frietze, Y Fu, J Gertz, F Grubert, A Harmanci, P Jain, M Kasowski, P Lacroute, JJ Leng, J Lian, H Monahan, H O'Geen, Z Ouyang, EC Partridge, D Patacsil, F Pauli, D Raha, L Ramirez, TE Reddy, B Reed, M Shi, T Slifer, J Wang, L Wu, X Yang, KY Yip, G Zilberman-Schapira, S Batzoglou, A Sidow, PJ Farnham, RM Myers, SM Weissman, M Snyder (2012). Nature 489: 91-100.
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, A Tanzer, J Lagarde, W Lin, F Schlesinger, C Xue, GK Marinov, J Khatun, BA Williams, C Zaleski, J Rozowsky, M Roder, F Kokocinski, RF Abdelhamid, T Alioto, I Antoshechkin, MT Baer, NS Bar, P Batut, K Bell, I Bell, S Chakrabortty, X Chen, J Chrast, J Curado, T Derrien, J Drenkow, E Dumais, J Dumais, R Duttagupta, E Falconnet, M Fastuca, K Fejes-Toth, P Ferreira, S Foissac, MJ Fullwood, H Gao, D Gonzalez, A Gordon, H Gunawardena, C Howald, S Jha, R Johnson, P Kapranov, B King, C Kingswood, OJ Luo, E Park, K Persaud, JB Preall, P Ribeca, B Risk, D Robyr, M Sammeth, L Schaffer, LH See, A Shahab, J Skancke, AM Suzuki, H Takahashi, H Tilgner, D Trout, N Walters, H Wang, J Wrobel, Y Yu, X Ruan, Y Hayashizaki, J Harrow, M Gerstein, T Hubbard, A Reymond, SE Antonarakis, G Hannon, MC Giddings, Y Ruan, B Wold, P Carninci, R Guigo, TR Gingeras (2012). Nature 489: 101-8.
J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, F Kokocinski, BL Aken, D Barrell, A Zadissa, S Searle, I Barnes, A Bignell, V Boychenko, T Hunt, M Kay, G Mukherjee, J Rajan, G Despacio-Reyes, G Saunders, C Steward, R Harte, M Lin, C Howald, A Tanzer, T Derrien, J Chrast, N Walters, S Balasubramanian, B Pei, M Tress, JM Rodriguez, I Ezkurdia, J van Baren, M Brent, D Haussler, M Kellis, A Valencia, A Reymond, M Gerstein, R Guigo, TJ Hubbard (2012). Genome Res 22: 1760-74.
KY Yip, C Cheng, N Bhardwaj, JB Brown, J Leng, A Kundaje, J Rozowsky, E Birney, P Bickel, M Snyder, M Gerstein (2012). Genome Biol 13: R48.
C Cheng, R Alexander, R Min, J Leng, KY Yip, J Rozowsky, KK Yan, X Dong, S Djebali, Y Ruan, CA Davis, P Carninci, T Lassman, TR Gingeras, R Guigo, E Birney, Z Weng, M Snyder, M Gerstein (2012). Genome Res 22: 1658-67.
SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, BE Bernstein, P Bickel, JB Brown, P Cayting, Y Chen, G DeSalvo, C Epstein, KI Fisher-Aylor, G Euskirchen, M Gerstein, J Gertz, AJ Hartemink, MM Hoffman, VR Iyer, YL Jung, S Karmakar, M Kellis, PV Kharchenko, Q Li, T Liu, XS Liu, L Ma, A Milosavljevic, RM Myers, PJ Park, MJ Pazin, MD Perry, D Raha, TE Reddy, J Rozowsky, N Shoresh, A Sidow, M Slattery, JA Stamatoyannopoulos, MY Tolstorukov, KP White, S Xi, PJ Farnham, JD Lieb, BJ Wold, M Snyder (2012). Genome Res 22: 1813-31.
B Pei, C Sisu, A Frankish, C Howald, L Habegger, XJ Mu, R Harte, S Balasubramanian, A Tanzer, M Diekhans, A Reymond, TJ Hubbard, J Harrow, MB Gerstein (2012). Genome Biol 13: R51.
X Dong, MC Greven, A Kundaje, S Djebali, JB Brown, C Cheng, TR Gingeras, M Gerstein, R Guigo, E Birney, Z Weng (2012). Genome Biol 13: R53.
JQ Wu, M Seay, VP Schulz, M Hariharan, D Tuck, J Lian, J Du, M Shi, Z Ye, M Gerstein, MP Snyder, S Weissman (2012). PLoS Genet 8: e1002565.
HY Lam, C Pan, MJ Clark, P Lacroute, R Chen, R Haraksingh, M O'Huallachain, MB Gerstein, JM Kidd, CD Bustamante, M Snyder (2012). Nat Biotechnol 30: 226-9.
J Cotney, J Leng, S Oh, LE DeMare, SK Reilly, MB Gerstein, JP Noonan (2012). Genome Res 22: 1069-80.
M Vidal, DW Chan, M Gerstein, M Mann, GS Omenn, D Tagle, S Sechi, Workshop Participants (2012). Clin Proteomics 9: 6.
MJ Bamshad, JA Shendure, D Valle, A Hamosh, JR Lupski, RA Gibbs, E Boerwinkle, RP Lifton, M Gerstein, M Gunel, S Mane, DA Nickerson, Centers for Mendelian Genomics (2012). Am J Med Genet A 158A: 1523-5.
L Habegger, S Balasubramanian, DZ Chen, E Khurana, A Sboner, A Harmanci, J Rozowsky, D Clarke, M Snyder, M Gerstein (2012). Bioinformatics 28: 2267-9.
G Zilberman-Schapira, J Chen, M Gerstein (2012). Recent Pat DNA Gene Seq 6: 180-8.
TA Gianoulis, MA Griffin, DJ Spakowicz, BF Dunican, CJ Alpha, A Sboner, AM Sismour, C Kodira, M Egholm, GM Church, MB Gerstein, SA Strobel (2012). PLoS Genet 8: e1002558.
R Chen, GI Mias, J Li-Pook-Than, L Jiang, HY Lam, R Chen, E Miriami, KJ Karczewski, M Hariharan, FE Dewey, Y Cheng, MJ Clark, H Im, L Habegger, S Balasubramanian, M O'Huallachain, JT Dudley, S Hillenmeyer, R Haraksingh, D Sharon, G Euskirchen, P Lacroute, K Bettinger, AP Boyle, M Kasowski, F Grubert, S Seki, M Garcia, M Whirl-Carrillo, M Gallardo, MA Blasco, PL Greenberg, P Snyder, TE Klein, RB Altman, AJ Butte, EA Ashley, M Gerstein, KC Nadeau, H Tang, M Snyder (2012). Cell 148: 1293-307.
DG MacArthur, S Balasubramanian, A Frankish, N Huang, J Morris, K Walter, L Jostins, L Habegger, JK Pickrell, SB Montgomery, CA Albers, ZD Zhang, DF Conrad, G Lunter, H Zheng, Q Ayub, MA DePristo, E Banks, M Hu, RE Handsaker, JA Rosenfeld, M Fromer, M Jin, XJ Mu, E Khurana, K Ye, M Kay, GI Saunders, MM Suner, T Hunt, IH Barnes, C Amid, DR Carvalho-Silva, AH Bignell, C Snow, B Yngvadottir, S Bumpstead, DN Cooper, Y Xue, IG Romero, 1000 Genomes Project Consortium, J Wang, Y Li, RA Gibbs, SA McCarroll, ET Dermitzakis, JK Pritchard, JC Barrett, J Harrow, ME Hurles, MB Gerstein, C Tyler-Smith (2012). Science 335: 823-8.
G Li, X Ruan, RK Auerbach, KS Sandhu, M Zheng, P Wang, HM Poh, Y Goh, J Lim, J Zhang, HS Sim, SQ Peh, FH Mulawadi, CT Ong, YL Orlov, S Hong, Z Zhang, S Landt, D Raha, G Euskirchen, CL Wei, W Ge, H Wang, C Davis, KI Fisher-Aylor, A Mortazavi, M Gerstein, T Gingeras, B Wold, Y Sun, MJ Fullwood, E Cheung, E Liu, WK Sung, M Snyder, Y Ruan (2012). Cell 148: 84-98.
D Clarke, N Bhardwaj, MB Gerstein (2012). J Struct Biol 179: 320-6.
J Du, J Leng, L Habegger, A Sboner, D McDermott, M Gerstein (2012). PLoS One 7: e29175.



2011 (40)

HY Lam, MJ Clark, R Chen, R Chen, G Natsoulis, M O'Huallachain, FE Dewey, L Habegger, EA Ashley, MB Gerstein, AJ Butte, HP Ji, M Snyder (2011). Nat Biotechnol 30: 78-82.
N Bhardwaj, D Clarke, M Gerstein (2011). Proc Natl Acad Sci U S A 108: 20279-80.
D Greenbaum, A Sboner, XJ Mu, M Gerstein (2011). PLoS Comput Biol 7: e1002278.
D Lipman, P Flicek, S Salzberg, M Gerstein, R Knight (2011). Genome Biol 12: 402.
RR Haraksingh, A Abyzov, M Gerstein, AE Urban, M Snyder (2011). PLoS One 6: e27859.
C Cheng, KK Yan, W Hwang, J Qian, N Bhardwaj, J Rozowsky, ZJ Lu, W Niu, P Alves, M Kato, M Snyder, M Gerstein (2011). PLoS Comput Biol 7: e1002190.
C Cheng, C Shou, KY Yip, MB Gerstein (2011). Genome Biol 12: R111.
D Greenbaum, M Gerstein (2011). Am J Bioeth 11: 39-41.
C Cheng, R Min, M Gerstein (2011). Bioinformatics 27: 3221-7.
SC Flores, MB Gerstein (2011). BMC Bioinformatics 12: 417.
KY Yip, L Utz, S Sitwell, X Hu, SS Sidhu, BE Turk, M Gerstein, PM Kim (2011). BMC Biol 9: 53.
C Cheng, M Gerstein (2011). Nucleic Acids Res 40: 553-68.
MR Tanas, A Sboner, AM Oliveira, MR Erickson-Johnson, J Hespelt, PJ Hanwright, J Flanagan, Y Luo, K Fenwick, R Natrajan, C Mitsopoulos, M Zvelebil, BL Hoch, SW Weiss, M Debiec-Rychter, R Sciot, RB West, AJ Lazar, A Ashworth, JS Reis-Filho, CJ Lord, MB Gerstein, MA Rubin, BP Rubin (2011). Sci Transl Med 3: 98ra82.
N Bhardwaj, A Abyzov, D Clarke, C Shou, MB Gerstein (2011). Protein Sci 20: 1745-54.
A Sboner, XJ Mu, D Greenbaum, RK Auerbach, MB Gerstein (2011). Genome Biol 12: 125.
J Rozowsky, A Abyzov, J Wang, P Alves, D Raha, A Harmanci, J Leng, R Bjornson, Y Kong, N Kitabayashi, N Bhardwaj, M Rubin, M Snyder, M Gerstein (2011). Mol Syst Biol 7: 522.
ZD Zhang, J Du, H Lam, A Abyzov, AE Urban, M Snyder, M Gerstein (2011). BMC Genomics 12: 375.
MB Clark, PP Amaral, FJ Schlesinger, ME Dinger, RJ Taft, JL Rinn, CP Ponting, PF Stadler, KV Morris, A Morillon, JS Rozowsky, MB Gerstein, C Wahlestedt, Y Hayashizaki, P Carninci, TR Gingeras, JS Mattick (2011). PLoS Biol 9: e1000625; discussion e1001102.
KK Yan, M Gerstein (2011). PLoS One 6: e19917.
XJ Mu, ZJ Lu, Y Kong, HY Lam, MB Gerstein (2011). Nucleic Acids Res 39: 7058-76.
D Greenbaum, M Gerstein (2011). Am J Bioeth 11: 31-2.
ENCODE Project Consortium (2011). PLoS Biol 9: e1001046.
J Fasolo, A Sboner, MG Sun, H Yu, R Chen, D Sharon, PM Kim, M Gerstein, M Snyder (2011). Genes Dev 25: 767-78.
TA Gianoulis, A Agarwal, M Snyder, MB Gerstein (2011). Genome Biol 12: R32.
N Negre, CD Brown, L Ma, CA Bristow, SW Miller, U Wagner, P Kheradpour, ML Eaton, P Loriaux, R Sealfon, Z Li, H Ishii, RF Spokony, J Chen, L Hwang, C Cheng, RP Auburn, MB Davis, M Domanus, PK Shah, CA Morrison, J Zieba, S Suchy, L Senderowicz, A Victorsen, NA Bild, AJ Grundstad, D Hanley, DM MacAlpine, M Mannervik, K Venken, H Bellen, R White, M Gerstein, S Russell, RL Grossman, B Ren, JW Posakony, M Kellis, KP White (2011). Nature 471: 527-31.
GM Euskirchen, RK Auerbach, E Davidov, TA Gianoulis, G Zhong, J Rozowsky, N Bhardwaj, MB Gerstein, M Snyder (2011). PLoS Genet 7: e1002008.
J Jee, J Rozowsky, KY Yip, L Lochovsky, R Bjornson, G Zhong, Z Zhang, Y Fu, J Wang, Z Weng, M Gerstein (2011). Bioinformatics 27: 1152-4.
A Karpikov, J Rozowsky, M Gerstein (2011). BMC Bioinformatics 12: 57.
A Abyzov, AE Urban, M Snyder, M Gerstein (2011). Genome Res 21: 974-84.
C Cheng, KK Yan, KY Yip, J Rozowsky, R Alexander, C Shou, M Gerstein (2011). Genome Biol 12: R15.
MF Berger, MS Lawrence, F Demichelis, Y Drier, K Cibulskis, AY Sivachenko, A Sboner, R Esgueva, D Pflueger, C Sougnez, R Onofrio, SL Carter, K Park, L Habegger, L Ambrogio, T Fennell, M Parkin, G Saksena, D Voet, AH Ramos, TJ Pugh, J Wilkinson, S Fisher, W Winckler, S Mahan, K Ardlie, J Baldwin, JW Simons, N Kitabayashi, TY MacDonald, PW Kantoff, L Chin, SB Gabriel, MB Gerstein, TR Golub, M Meyerson, A Tewari, ES Lander, G Getz, MA Rubin, LA Garraway (2011). Nature 470: 214-20.
RE Mills, K Walter, C Stewart, RE Handsaker, K Chen, C Alkan, A Abyzov, SC Yoon, K Ye, RK Cheetham, A Chinwalla, DF Conrad, Y Fu, F Grubert, I Hajirasouliha, F Hormozdiari, LM Iakoucheva, Z Iqbal, S Kang, JM Kidd, MK Konkel, J Korn, E Khurana, D Kural, HY Lam, J Leng, R Li, Y Li, CY Lin, R Luo, XJ Mu, J Nemesh, HE Peckham, T Rausch, A Scally, X Shi, MP Stromberg, AM Stutz, AE Urban, JA Walker, J Wu, Y Zhang, ZD Zhang, MA Batzer, L Ding, GT Marth, G McVean, J Sebat, M Snyder, J Wang, K Ye, EE Eichler, MB Gerstein, ME Hurles, C Lee, SA McCarroll, JO Korbel, 1000 Genomes Project (2011). Nature 470: 59-65.
C Shou, N Bhardwaj, HY Lam, KK Yan, PM Kim, M Snyder, MB Gerstein (2011). PLoS Comput Biol 7: e1001050.
A Abyzov, M Gerstein (2011). Bioinformatics 27: 595-603.
S Balasubramanian, L Habegger, A Frankish, DG MacArthur, R Harte, C Tyler-Smith, J Harrow, M Gerstein (2011). Genes Dev 25: 1-10.
FM Vaccarino, AE Urban, HE Stevens, A Szekely, A Abyzov, EL Grigorenko, M Gerstein, S Weissman (2011). J Child Psychol Psychiatry 52: 504-16.
ZJ Lu, KY Yip, G Wang, C Shou, LW Hillier, E Khurana, A Agarwal, R Auerbach, J Rozowsky, C Cheng, M Kato, DM Miller, F Slack, M Snyder, RH Waterston, V Reinke, MB Gerstein (2011). Genome Res 21: 276-85.
W Niu, ZJ Lu, M Zhong, M Sarov, JI Murray, CM Brdlik, J Janette, C Chen, P Alves, E Preston, C Slightham, L Jiang, AA Hyman, SK Kim, RH Waterston, M Gerstein, M Snyder, V Reinke (2011). Genome Res 21: 245-54.
L Habegger, A Sboner, TA Gianoulis, J Rozowsky, A Agarwal, M Snyder, M Gerstein (2011). Bioinformatics 27: 281-3.
D Pflueger, S Terry, A Sboner, L Habegger, R Esgueva, PC Lin, MA Svensson, N Kitabayashi, BJ Moss, TY MacDonald, X Cao, T Barrette, AK Tewari, MS Chee, AM Chinnaiyan, DS Rickman, F Demichelis, MB Gerstein, MA Rubin (2011). Genome Res 21: 56-67.



2010 (32)

Yale Law School Roundtable on Data and Code Sharing (2010). Computing in Science & Engineering 12(5): 8-13 (Sept/Oct).
MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng, BI Arshinoff, T Liu, KY Yip, R Robilotto, A Rechtsteiner, K Ikegami, P Alves, A Chateigner, M Perry, M Morris, RK Auerbach, X Feng, J Leng, A Vielle, W Niu, K Rhrissorrakrai, A Agarwal, RP Alexander, G Barber, CM Brdlik, J Brennan, JJ Brouillet, A Carr, MS Cheung, H Clawson, S Contrino, LO Dannenberg, AF Dernburg, A Desai, L Dick, AC Dose, J Du, T Egelhofer, S Ercan, G Euskirchen, B Ewing, EA Feingold, R Gassmann, PJ Good, P Green, F Gullier, M Gutwein, MS Guyer, L Habegger, T Han, JG Henikoff, SR Henz, A Hinrichs, H Holster, T Hyman, AL Iniguez, J Janette, M Jensen, M Kato, WJ Kent, E Kephart, V Khivansara, E Khurana, JK Kim, P Kolasinska-Zwierz, EC Lai, I Latorre, A Leahey, S Lewis, P Lloyd, L Lochovsky, RF Lowdon, Y Lubling, R Lyne, M MacCoss, SD Mackowiak, M Mangone, S McKay, D Mecenas, G Merrihew, DM Miller, A Muroyama, JI Murray, SL Ooi, H Pham, T Phippen, EA Preston, N Rajewsky, G Ratsch, H Rosenbaum, J Rozowsky, K Rutherford, P Ruzanov, M Sarov, R Sasidharan, A Sboner, P Scheid, E Segal, H Shin, C Shou, FJ Slack, C Slightam, R Smith, WC Spencer, EO Stinson, S Taing, T Takasaki, D Vafeados, K Voronina, G Wang, NL Washington, CM Whittle, B Wu, KK Yan, G Zeller, Z Zha, M Zhong, X Zhou, modENCODE Consortium, J Ahringer, S Strome, KC Gunsalus, G Micklem, XS Liu, V Reinke, SK Kim, LW Hillier, S Henikoff, F Piano, M Snyder, L Stein, JD Lieb, RH Waterston (2010). Science 330: 1775-87.
N Bhardwaj, PM Kim, MB Gerstein (2010). Sci Signal 3: ra79.
X Li, TA Gianoulis, KY Yip, M Gerstein, M Snyder (2010). Cell 143: 639-50.
ZD Zhang, MB Gerstein (2010). BMC Bioinformatics 11: 539.
1000 Genomes Project Consortium, GR Abecasis, D Altshuler, A Auton, LD Brooks, RM Durbin, RA Gibbs, ME Hurles, GA McVean (2010). Nature 467: 1061-73.
A Sboner, L Habegger, D Pflueger, S Terry, DZ Chen, JS Rozowsky, AK Tewari, N Kitabayashi, BJ Moss, MS Chee, F Demichelis, MA Rubin, MB Gerstein (2010). Genome Biol 11: R104.
KH Cheung, M Samwald, RK Auerbach, MB Gerstein (2010). Mol Syst Biol 6: 403.
RP Alexander, G Fang, J Rozowsky, M Snyder, MB Gerstein (2010). Nat Rev Genet 11: 559-71.
E Khurana, HY Lam, C Cheng, N Carriero, P Cayting, MB Gerstein (2010). Nucleic Acids Res 38: 6997-7007.
A Agarwal, D Koppstein, J Rozowsky, A Sboner, L Habegger, LW Hillier, R Sasidharan, V Reinke, RH Waterston, M Gerstein (2010). BMC Genomics 11: 383.
ME Holford, E Khurana, KH Cheung, M Gerstein (2010). Bioinformatics 26: i71-8.
N Bhardwaj, MB Carson, A Abyzov, KK Yan, H Lu, MB Gerstein (2010). PLoS Comput Biol 6: e1000755.
NR Voss, M Gerstein (2010). Nucleic Acids Res 38: W555-62.
HY Lam, PM Kim, J Mok, R Tonikian, SS Sidhu, BE Turk, M Snyder, MB Gerstein (2010). BMC Bioinformatics 11: 243.
KK Yan, G Fang, N Bhardwaj, RP Alexander, M Gerstein (2010). Proc Natl Acad Sci U S A 107: 9186-91.
PV Patel, TA Gianoulis, RD Bjornson, KY Yip, DM Engelman, MB Gerstein (2010). Genome Res 20: 960-71.
Y Lee, X Yang, Y Huang, H Fan, Q Zhang, Y Wu, J Li, R Hasina, C Cheng, MW Lingen, MB Gerstein, RR Weichselbaum, HR Xing, YA Lussier (2010). PLoS Comput Biol 6: e1000730.
G Fang, N Bhardwaj, R Robilotto, MB Gerstein (2010). PLoS Comput Biol 6: e1000703.
N Bhardwaj, KK Yan, MB Gerstein (2010). Proc Natl Acad Sci U S A 107: 6841-6.
M Kasowski, F Grubert, C Heffelfinger, M Hariharan, A Asabere, SM Waszak, L Habegger, J Rozowsky, M Shi, AE Urban, MY Hong, KJ Karczewski, W Huber, SM Weissman, MB Gerstein, JO Korbel, M Snyder (2010). Science 328: 232-5.
A Sboner, F Demichelis, S Calza, Y Pawitan, SR Setlur, Y Hoshida, S Perner, HO Adami, K Fall, LA Mucci, PW Kantoff, M Stampfer, SO Andersson, E Varenhorst, JE Johansson, MB Gerstein, TR Golub, MA Rubin, O Andren (2010). BMC Med Genomics 3: 8.
ZD Zhang, A Frankish, T Hunt, J Harrow, M Gerstein (2010). Genome Biol 11: R26.
N Bhardwaj, M Gerstein, H Lu (2010). BMC Bioinformatics 11 Suppl 1: S6.
JQ Wu, L Habegger, P Noisa, A Szekely, C Qiu, S Hutchison, D Raha, M Egholm, H Lin, S Weissman, W Cui, M Gerstein, M Snyder (2010). Proc Natl Acad Sci U S A 107: 5254-9.
M Snyder, J Du, M Gerstein (2010). Genes Dev 24: 423-31.
M Zhong, W Niu, ZJ Lu, M Sarov, JI Murray, J Janette, D Raha, KL Sheaffer, HY Lam, E Preston, C Slightham, LW Hillier, T Brock, A Agarwal, R Auerbach, AA Hyman, M Gerstein, SE Mango, SK Kim, RH Waterston, V Reinke, M Snyder (2010). PLoS Genet 6: e1000848.
J Mok, PM Kim, HY Lam, S Piccirillo, X Zhou, GR Jeschke, DL Sheridan, SA Parker, V Desai, M Jwa, E Cameroni, H Niu, M Good, A Remenyi, JL Ma, YJ Sheu, HE Sassi, R Sopko, CS Chan, C De Virgilio, NM Hollingsworth, WA Lim, DF Stern, B Stillman, BJ Andrews, MB Gerstein, M Snyder, BE Turk (2010). Sci Signal 3: ra12.
D Raha, Z Wang, Z Moqtaderi, L Wu, G Zhong, M Gerstein, K Struhl, M Snyder (2010). Proc Natl Acad Sci U S A 107: 3639-44.
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HY Lam, XJ Mu, AM Stutz, A Tanzer, PD Cayting, M Snyder, PM Kim, JO Korbel, MB Gerstein (2010). Nat Biotechnol 28: 47-55.
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2009 (39)

D Greenbaum, MB Gerstein (2009). Science 323: 210.
A Canaan, I Haviv, AE Urban, VP Schulz, S Hartman, Z Zhang, D Palejev, AB Deisseroth, J Lacy, M Snyder, M Gerstein, SM Weissman (2009). Proc Natl Acad Sci U S A 106: 22421-6.
D Greenbaum, M Gerstein (2009). Am J Bioeth 9: 15-9.
R Tonikian, X Xin, CP Toret, D Gfeller, C Landgraf, S Panni, S Paoluzi, L Castagnoli, B Currell, S Seshagiri, H Yu, B Winsor, M Vidal, MB Gerstein, GD Bader, R Volkmer, G Cesareni, DG Drubin, PM Kim, SS Sidhu, C Boone (2009). PLoS Biol 7: e1000218.
YJ Liu, D Zheng, S Balasubramanian, N Carriero, E Khurana, R Robilotto, MB Gerstein (2009). BMC Genomics 10: 480.
A Sboner, A Karpikov, G Chen, M Smith, D Mattoon, M Dawn, L Freeman-Cook, B Schweitzer, MB Gerstein (2009). J Proteome Res 8: 5451-64.
C Cheng, N Bhardwaj, M Gerstein (2009). BMC Genomics 10: 431.
Y Arinaminpathy, E Khurana, DM Engelman, MB Gerstein (2009). Drug Discov Today 14: 1130-5.
C Cheng, X Fu, P Alves, M Gerstein (2009). Genome Biol 10: R90.
RK Auerbach, G Euskirchen, J Rozowsky, N Lamarre-Vincent, Z Moqtaderi, P Lefrancois, K Struhl, M Gerstein, M Snyder (2009). Proc Natl Acad Sci U S A 106: 14926-31.
KY Yip, PM Kim, D McDermott, M Gerstein (2009). BMC Bioinformatics 10: 241.
A Rzhetsky, M Seringhaus, MB Gerstein (2009). PLoS Comput Biol 5: e1000411.
D Pflueger, DS Rickman, A Sboner, S Perner, CJ LaFargue, MA Svensson, BJ Moss, N Kitabayashi, Y Pan, A de la Taille, R Kuefer, AK Tewari, F Demichelis, MS Chee, MB Gerstein, MA Rubin (2009). Neoplasia 11: 804-11.
X Guo, Z Zhang, MB Gerstein, D Zheng (2009). PLoS Comput Biol 5: e1000449.
RP Alexander, PM Kim, T Emonet, MB Gerstein (2009). Sci Signal 2: pe44.
R Sasidharan, A Agarwal, J Rozowsky, M Gerstein (2009). BMC Res Notes 2: 150.
K Talbert-Slagle, S Marlatt, FN Barrera, E Khurana, J Oates, M Gerstein, DM Engelman, AM Dixon, D Dimaio (2009). J Virol 83: 9773-85.
JO Korbel, T Tirosh-Wagner, AE Urban, XN Chen, M Kasowski, L Dai, F Grubert, C Erdman, MC Gao, K Lange, EM Sobel, GM Barlow, AS Aylsworth, NJ Carpenter, RD Clark, MY Cohen, E Doran, T Falik-Zaccai, SO Lewin, IT Lott, BC McGillivray, JB Moeschler, MJ Pettenati, SM Pueschel, KW Rao, LG Shaffer, M Shohat, AJ Van Riper, D Warburton, S Weissman, MB Gerstein, M Snyder, JR Korenberg (2009). Proc Natl Acad Sci U S A 106: 12031-6.
J Du, RD Bjornson, ZD Zhang, Y Kong, M Snyder, MB Gerstein (2009). PLoS Comput Biol 5: e1000432.
SE Celniker, LA Dillon, MB Gerstein, KC Gunsalus, S Henikoff, GH Karpen, M Kellis, EC Lai, JD Lieb, DM MacAlpine, G Micklem, F Piano, M Snyder, L Stein, KP White, RH Waterston, modENCODE Consortium (2009). Nature 459: 927-30.
Y Xia, EA Franzosa, MB Gerstein (2009). PLoS Comput Biol 5: e1000413.
L Ni, C Bruce, C Hart, J Leigh-Bell, D Gelperin, L Umansky, MB Gerstein, M Snyder (2009). Genes Dev 23: 1351-63.
N Bhardwaj, M Gerstein (2009). Protein Sci 18: 1230-40.
M Snyder, S Weissman, M Gerstein (2009). Mol Syst Biol 5: 273.
C Cheng, LM Li, P Alves, M Gerstein (2009). BMC Genomics 10: 225.
Y Mishima, C Abreu-Goodger, AA Staton, C Stahlhut, C Shou, C Cheng, M Gerstein, AJ Enright, AJ Giraldez (2009). Genes Dev 23: 619-32.
JO Korbel, A Abyzov, XJ Mu, N Carriero, P Cayting, Z Zhang, M Snyder, MB Gerstein (2009). Genome Biol 10: R23.
KS Keating, SC Flores, MB Gerstein, LA Kuhn (2009). Protein Sci 18: 359-71.
TA Gianoulis, J Raes, PV Patel, R Bjornson, JO Korbel, I Letunic, T Yamada, A Paccanaro, LJ Jensen, M Snyder, P Bork, MB Gerstein (2009). Proc Natl Acad Sci U S A 106: 1374-9.
P Lefrancois, GM Euskirchen, RK Auerbach, J Rozowsky, T Gibson, CM Yellman, M Gerstein, M Snyder (2009). BMC Genomics 10: 37.
F Demichelis, SR Setlur, R Beroukhim, S Perner, JO Korbel, CJ Lafargue, D Pflueger, C Pina, MD Hofer, A Sboner, MA Svensson, DS Rickman, A Urban, M Snyder, M Meyerson, C Lee, MB Gerstein, R Kuefer, MA Rubin (2009). Genes Chromosomes Cancer 48: 366-80.
X Zhang, Z Lian, C Padden, MB Gerstein, J Rozowsky, M Snyder, TR Gingeras, P Kapranov, SM Weissman, PE Newburger (2009). Blood 113: 2526-34.
S Balasubramanian, D Zheng, YJ Liu, G Fang, A Frankish, N Carriero, R Robilotto, P Cayting, M Gerstein (2009). Genome Biol 10: R2.
J Rozowsky, G Euskirchen, RK Auerbach, ZD Zhang, T Gibson, R Bjornson, N Carriero, M Snyder, MB Gerstein (2009). Nat Biotechnol 27: 66-75.
SC Popescu, GV Popescu, S Bachan, Z Zhang, M Gerstein, M Snyder, SP Dinesh-Kumar (2009). Genes Dev 23: 80-92.
LY Wang, A Abyzov, JO Korbel, M Snyder, M Gerstein (2009). Genome Res 19: 106-17.
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HY Lam, E Khurana, G Fang, P Cayting, N Carriero, KH Cheung, MB Gerstein (2009). Nucleic Acids Res 37: D738-43.



2008 (25)

M Seringhaus, M Gerstein (2008). American Scientist 96:466-473 (Nov-Dec)
M Seringhaus, J Rozowsky, T Royce, U Nagalakshmi, J Jee, M Snyder, M Gerstein (2008). BMC Genomics 9: 635.
AY Yam, Y Xia, HT Lin, A Burlingame, M Gerstein, J Frydman (2008). Nat Struct Mol Biol 15: 1255-62.
D Greenbaum, J Du, M Gerstein (2008). Am J Bioeth 8: 71-4.
Y Hasin, T Olender, M Khen, C Gonzaga-Jauregui, PM Kim, AE Urban, M Snyder, MB Gerstein, D Lancet, JO Korbel (2008). PLoS Genet 4: e1000249.
PM Kim, HY Lam, AE Urban, JO Korbel, J Affourtit, F Grubert, X Chen, S Weissman, M Snyder, MB Gerstein (2008). Genome Res 18: 1865-74.
ZD Zhang, J Rozowsky, M Snyder, J Chang, M Gerstein (2008). PLoS Comput Biol 4: e1000158.
R Sasidharan, A Smith, M Gerstein (2008). PLoS One 3: e2726.
A Rzhetsky, M Seringhaus, M Gerstein (2008). Cell 134: 9-13.
R Sasidharan, M Gerstein (2008). Nature 453: 729-31.
JO Korbel, PM Kim, X Chen, AE Urban, S Weissman, M Snyder, MB Gerstein (2008). Curr Opin Struct Biol 18: 366-74.
YJ Huang, D Hang, LJ Lu, L Tong, MB Gerstein, GT Montelione (2008). Mol Cell Proteomics 7: 2048-60.
Z Lian, A Karpikov, J Lian, MC Mahajan, S Hartman, M Gerstein, M Snyder, SM Weissman (2008). Genome Res 18: 1224-37.
KD Mertz, F Demichelis, A Sboner, MS Hirsch, P Dal Cin, K Struckmann, M Storz, S Scherrer, DM Schmid, RT Strebel, NM Probst-Hensch, M Gerstein, H Moch, MA Rubin (2008). Int J Cancer 123: 569-76.
U Nagalakshmi, Z Wang, K Waern, C Shou, D Raha, M Gerstein, M Snyder (2008). Science 320: 1344-9.
SC Flores, KS Keating, J Painter, F Morcos, K Nguyen, EA Merritt, LA Kuhn, MB Gerstein (2008). Proteins 73: 299-319.
ZD Zhang, G Weinstock, M Gerstein (2008). J Mol Evol 66: 446-56.
PE Bourne, JL Fink, M Gerstein (2008). PLoS Comput Biol 4: e1000037.
PM Kim, A Sboner, Y Xia, M Gerstein (2008). Mol Syst Biol 4: 179.
M Seringhaus, M Gerstein (2008). FEBS Lett 582: 1170.
DS Johnson, W Li, DB Gordon, A Bhattacharjee, B Curry, J Ghosh, L Brizuela, JS Carroll, M Brown, P Flicek, CM Koch, I Dunham, M Bieda, X Xu, PJ Farnham, P Kapranov, DA Nix, TR Gingeras, X Zhang, H Holster, N Jiang, RD Green, JS Song, SA McCuine, E Anton, L Nguyen, ND Trinklein, Z Ye, K Ching, D Hawkins, B Ren, PC Scacheri, J Rozowsky, A Karpikov, G Euskirchen, S Weissman, M Gerstein, M Snyder, A Yang, Z Moqtaderi, H Hirsch, HP Shulha, Y Fu, Z Weng, K Struhl, RM Myers, JD Lieb, XS Liu (2008). Genome Res 18: 393-403.
MR Seringhaus, PD Cayting, MB Gerstein (2008). Genome Biol 9: 401.
JQ Wu, J Du, J Rozowsky, Z Zhang, AE Urban, G Euskirchen, S Weissman, M Gerstein, M Snyder (2008). Genome Biol 9: R3.
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2007 (45)

KH Cheung, AK Smith, KYL Yip, CJO Baker, MB Gerstein (2007). in Semantic Web: Revolutionizing Knowledge Discovery in the Life Sciences (eds. C Baker and K Cheung, Springer, NY), pp. 11-30
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SR Setlur, TE Royce, A Sboner, JM Mosquera, F Demichelis, MD Hofer, KD Mertz, M Gerstein, MA Rubin (2007). Cancer Res 67: 10296-303.
A Smith, K Cheung, M Krauthammer, M Schultz, M Gerstein (2007). Bioinformatics 23: 3073-9.
AJ McClellan, Y Xia, AM Deutschbauer, RW Davis, M Gerstein, J Frydman (2007). Cell 131: 121-35.
JO Korbel, AE Urban, JP Affourtit, B Godwin, F Grubert, JF Simons, PM Kim, D Palejev, NJ Carriero, L Du, BE Taillon, Z Chen, A Tanzer, AC Saunders, J Chi, F Yang, NP Carter, ME Hurles, SM Weissman, TT Harkins, MB Gerstein, M Egholm, M Snyder (2007). Science 318: 420-6.
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AR Borneman, TA Gianoulis, ZD Zhang, H Yu, J Rozowsky, MR Seringhaus, LY Wang, M Gerstein, M Snyder (2007). Science 317: 815-9.
S Orchard, L Salwinski, S Kerrien, L Montecchi-Palazzi, M Oesterheld, V Stumpflen, A Ceol, A Chatr-aryamontri, J Armstrong, P Woollard, JJ Salama, S Moore, J Wojcik, GD Bader, M Vidal, ME Cusick, M Gerstein, AC Gavin, G Superti-Furga, J Greenblatt, J Bader, P Uetz, M Tyers, P Legrain, S Fields, N Mulder, M Gilson, M Niepmann, L Burgoon, J De Las Rivas, C Prieto, VM Perreau, C Hogue, HW Mewes, R Apweiler, I Xenarios, D Eisenberg, G Cesareni, H Hermjakob (2007). Nat Biotechnol 25: 894-8.
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R Jansen, D Greenbaum, M Gerstein (2002). Genome Res 12: 37-46.
M Gerstein, N Lan, R Jansen (2002). Science 295: 284-7.
N Lan, R Jansen, M Gerstein (2002). Proceedings of the IEEE 90:1848-1858
M Gerstein, J Junker (2002). Nature Yearbook of Science and Technology 210-212 (ed. D Butler, Palgrave Macmillan Publishers)
P Berman, P Bertone, B DasGupta, M Gerstein, M-Y Kao, M Snyder (2002). Proceedings of the 2nd International Workshop on Algorithms in Bioinformatics. Springer-Verlag LNCS 2452: 419-433
R Jansen, N Lan, J Qian, M Gerstein (2002). J Struct Funct Genomics 2: 71-81.
CE Horak, NM Luscombe, J Qian, P Bertone, S Piccirrillo, M Gerstein, M Snyder (2002). Genes Dev 16: 3017-33.
KH Cheung, K White, J Hager, M Gerstein, V Reinke, K Nelson, P Masiar, R Srivastava, Y Li, J Li, H Zhao, J Li, DB Allison, M Snyder, P Miller, K Williams (2002). Proc AMIA Symp : 140-4.
D Schneider, Y Liu, M Gerstein, DM Engelman (2002). FEBS Lett 532: 231-6.
A Mateos, J Dopazo, R Jansen, Y Tu, M Gerstein, G Stolovitzky (2002). Genome Res 12: 1703-15.
ZL Zhang, PM Harrison, M Gerstein (2002). J Mol Biol 323: 811-22.
J Lin, J Qian, D Greenbaum, P Bertone, R Das, N Echols, A Senes, B Stenger, M Gerstein (2002). Nucleic Acids Res 30: 4574-82.
Z Lian, Y Kluger, DS Greenbaum, D Tuck, M Gerstein, N Berliner, SM Weissman, PE Newburger (2002). Blood 100: 3209-20.
Y Liu, DM Engelman, M Gerstein (2002). Genome Biol 3: research0054.
Z Zhang, P Harrison, M Gerstein (2002). Genome Res 12: 1466-82.
AM Edwards, B Kus, R Jansen, D Greenbaum, J Greenblatt, M Gerstein (2002). Trends Genet 18: 529-36.
WG Krebs, V Alexandrov, CA Wilson, N Echols, H Yu, M Gerstein (2002). Proteins 48: 682-95.
NM Luscombe, J Qian, Z Zhang, T Johnson, M Gerstein (2002). Genome Biol 3: RESEARCH0040.
G Giaever, AM Chu, L Ni, C Connelly, L Riles, S Veronneau, S Dow, A Lucau-Danila, K Anderson, B Andre, AP Arkin, A Astromoff, M El-Bakkoury, R Bangham, R Benito, S Brachat, S Campanaro, M Curtiss, K Davis, A Deutschbauer, KD Entian, P Flaherty, F Foury, DJ Garfinkel, M Gerstein, D Gotte, U Guldener, JH Hegemann, S Hempel, Z Herman, DF Jaramillo, DE Kelly, SL Kelly, P Kotter, D LaBonte, DC Lamb, N Lan, H Liang, H Liao, L Liu, C Luo, M Lussier, R Mao, P Menard, SL Ooi, JL Revuelta, CJ Roberts, M Rose, P Ross-Macdonald, B Scherens, G Schimmack, B Shafer, DD Shoemaker, S Sookhai-Mahadeo, RK Storms, JN Strathern, G Valle, M Voet, G Volckaert, CY Wang, TR Ward, J Wilhelmy, EA Winzeler, Y Yang, G Yen, E Youngman, K Yu, H Bussey, JD Boeke, M Snyder, P Philippsen, RW Davis, M Johnston (2002). Nature 418: 387-91.
S Balasubramanian, P Harrison, H Hegyi, P Bertone, N Luscombe, N Echols, P McGarvey, Z Zhang, M Gerstein (2002). Pharmacogenomics 3: 393-402.
N Echols, P Harrison, S Balasubramanian, NM Luscombe, P Bertone, Z Zhang, M Gerstein (2002). Nucleic Acids Res 30: 2515-23.
CE Horak, MC Mahajan, NM Luscombe, M Gerstein, SM Weissman, M Snyder (2002). Proc Natl Acad Sci U S A 99: 2924-9.
Y Liu, NM Luscombe, V Alexandrov, P Bertone, P Harrison, Z Zhang, M Gerstein (2002). Genome Biol 3: REPORTS4004.
A Kumar, PM Harrison, KH Cheung, N Lan, N Echols, P Bertone, P Miller, MB Gerstein, M Snyder (2002). Nat Biotechnol 20: 58-63.



2001 (21)

J Qian, NM Luscombe, M Gerstein (2001). J Mol Biol 313: 673-81.
J Qian, M Dolled-Filhart, J Lin, H Yu, M Gerstein (2001). J Mol Biol 314: 1053-66.
H Hegyi, M Gerstein (2001). Genome Res 11: 1632-40.
NM Luscombe, D Greenbaum, M Gerstein (2001). Methods Inf Med 40: 346-58.
R Das, J Junker, D Greenbaum, MB Gerstein (2001). Pharmacogenomics J 1: 115-25.
H Zhu, M Bilgin, R Bangham, D Hall, A Casamayor, P Bertone, N Lan, R Jansen, S Bidlingmaier, T Houfek, T Mitchell, P Miller, RA Dean, M Gerstein, M Snyder (2001). Science 293: 2101-5.
V Alexandrov, M Gerstein (2001). International Journal of Quantum Chemistry 85:693-696
WK Olson, M Bansal, SK Burley, RE Dickerson, M Gerstein, SC Harvey, U Heinemann, XJ Lu, S Neidle, Z Shakked, H Sklenar, M Suzuki, CS Tung, E Westhof, C Wolberger, HM Berman (2001). J Mol Biol 313: 229-37.
J Tsai, N Voss, M Gerstein (2001). Bioinformatics 17: 949-56.
D Greenbaum, NM Luscombe, R Jansen, J Qian, M Gerstein (2001). Genome Res 11: 1463-8.
M Gerstein, F M Richards (2001). International Tables for Crystallography (Volume F, Chapter 22.1.1, pages 531-539; M Rossmann & E Arnold, editors; Dordrecht: Kluwer)
P Harrison, M Gerstein (2001). Trends Biochem Sci 26:204-205
P Bertone, M Gerstein (2001). IEEE Eng Med Biol Mag 20: 33-40.
Z Lian, L Wang, S Yamaga, W Bonds, Y Beazer-Barclay, Y Kluger, M Gerstein, PE Newburger, N Berliner, SM Weissman (2001). Blood 98: 513-24.
YV Subrahmanyam, S Yamaga, Y Prashar, HH Lee, NP Hoe, Y Kluger, M Gerstein, JD Goguen, PE Newburger, SM Weissman (2001). Blood 97: 2457-68.
P Bertone, Y Kluger, N Lan, D Zheng, D Christendat, A Yee, AM Edwards, CH Arrowsmith, GT Montelione, M Gerstein (2001). Nucleic Acids Res 29: 2884-98.
M Gerstein, B Honig (2001). Current Opinion in Structural Biology 11: 327-329.
N Luscombe, D Greenbaum, M Gerstein (2001). Intl. Medical Informatics Association (Yearbook, Pages 83-99)
PM Harrison, N Echols, MB Gerstein (2001). Nucleic Acids Res 29: 818-30.
J Qian, B Stenger, CA Wilson, J Lin, R Jansen, SA Teichmann, J Park, WG Krebs, H Yu, V Alexandrov, N Echols, M Gerstein (2001). Nucleic Acids Res 29: 1750-64.
Cheung KH, Liu Y, Kumar K, Snyder M, Gerstein M, Miller P (2001). IEEE International Symposium on Bio-Informatics and Biomedical Engineering (BIBE) pp. 97-103



2000 (18)

M Gerstein (2000). Nat Struct Biol 7 Suppl: 960-3.
R Das, H Hegyi, M Gerstein (2000). J Mol Microbiol Biotechnol 2: 387-92.
D Christendat, A Yee, A Dharamsi, Y Kluger, M Gerstein, CH Arrowsmith, AM Edwards (2000). Prog Biophys Mol Biol 73: 339-45.
H Zhu, JF Klemic, S Chang, P Bertone, A Casamayor, KG Klemic, D Smith, M Gerstein, MA Reed, M Snyder (2000). Nat Genet 26: 283-9.
A Drawid, R Jansen, M Gerstein (2000). Trends Genet 16: 426-30.
M Gerstein, R Jansen (2000). Curr Opin Struct Biol 10: 574-84.
R Das, M Gerstein (2000). Funct Integr Genomics 1: 76-88.
GJ Naylor, M Gerstein (2000). J Mol Evol 51: 223-33.
D Christendat, A Yee, A Dharamsi, Y Kluger, A Savchenko, JR Cort, V Booth, CD Mackereth, V Saridakis, I Ekiel, G Kozlov, KL Maxwell, N Wu, LP McIntosh, K Gehring, MA Kennedy, AR Davidson, EF Pai, M Gerstein, AM Edwards, CH Arrowsmith (2000). Nat Struct Biol 7: 903-9.
A Drawid, M Gerstein (2000). J Mol Biol 301: 1059-75.
S Balasubramanian, T Schneider, M Gerstein, L Regan (2000). Nucleic Acids Res 28: 3075-82.
M Gerstein, J Lin, H Hegyi (2000). Pac Symp Biocomput : 30-41.
M Gerstein (2000). Science 288: 1590.
J Lin, M Gerstein (2000). Genome Res 10: 808-18.
WG Krebs, M Gerstein (2000). Nucleic Acids Res 28: 1665-75.
A Senes, M Gerstein, DM Engelman (2000). J Mol Biol 296: 921-36.
CA Wilson, J Kreychman, M Gerstein (2000). J Mol Biol 297: 233-49.
R Jansen, M Gerstein (2000). Nucleic Acids Res 28: 1481-8.



1999 (10)

P Ross-Macdonald, PS Coelho, T Roemer, S Agarwal, A Kumar, R Jansen, KH Cheung, A Sheehan, D Symoniatis, L Umansky, M Heidtman, FK Nelson, H Iwasaki, K Hager, M Gerstein, P Miller, GS Roeder, M Snyder (1999). Nature 402: 413-8.
M Gerstein, C Chothia (1999). Science 285: 1682-3.
M Gerstein, R Jansen, T Johnson, J Tsai, W Krebs (1999). Rigidity Theory and Applications 401-442 (ed. M F Thorpe and P M Duxbury, Kluwer Academic/Plenum Publishers).
M Gerstein (1999). Bioinformatics 15: 429-31.
ES Brodkin, M Gerstein (1999). N Engl J Med 341: 1080; author reply 1081.
J Tsai, R Taylor, C Chothia, M Gerstein (1999). J Mol Biol 290: 253-66.
SA Teichmann, C Chothia, M Gerstein (1999). Curr Opin Struct Biol 9: 390-9.
M Gerstein (1999). Nature 399: 101.
H Hegyi, M Gerstein (1999). J Mol Biol 288: 147-64.
M Gerstein (1999). Nature 398: 20.



1998 (9)

M Gerstein, H Hegyi (1998). FEMS Microbiol Rev 22: 277-304.
M Gerstein (1998). Fold Des 3: 497-512.
M Gerstein (1998). Proteins 33: 518-34.
M Gerstein, M Levitt (1998). Sci Am 279: 100-5.
M Gerstein (1998). Bioinformatics 14: 707-14.
M Gerstein, W Krebs (1998). Nucleic Acids Res 26: 4280-90.
J Fu, M Gerstein, PR David, AL Gnatt, DA Bushnell, AM Edwards, RD Kornberg (1998). J Mol Biol 280: 317-22.
M Levitt, M Gerstein (1998). Proc Natl Acad Sci U S A 95: 5913-20.
M Gerstein, M Levitt (1998). Protein Sci 7: 445-56.



1997 (6)

M Gerstein (1997). J Mol Biol 274: 562-76.
J Tsai, M Gerstein, M Levitt (1997). Protein Sci 6: 2606-16.
M Gerstein, M Levitt (1997). Proc Natl Acad Sci U S A 94: 11911-6.
C Chothia, M Gerstein (1997). Nature 385: 579, 581.
M Levitt, M Gerstein, E Huang, S Subbiah, J Tsai (1997). Annu Rev Biochem 66: 549-79.
R Schmidt, M Gerstein, RB Altman (1997). Protein Sci 6: 246-8.



1996 (4)

R Becker, M Gerstein (1996). New Jersey Lawyer Magazine 179: 12-27 (September).
J Tsai, M Gerstein, M Levitt (1996). Journal of Chemical Physics 104: 9417-9430
M Gerstein, C Chothia (1996). Proc Natl Acad Sci U S A 93: 10167-72.
M Gerstein, M Levitt (1996). Proc Int Conf Intell Syst Mol Biol 4: 59-67.



1995 (7)

M Gerstein, RB Altman (1995). Comput Appl Biosci 11: 633-44.
M Suzuki, M Gerstein (1995). Proteins 23: 525-35.
M Gerstein, RB Altman (1995). J Mol Biol 251: 161-75.
M Gerstein, J Tsai, M Levitt (1995). J Mol Biol 249: 955-66.
RB Altman, C Hughes, MB Gerstein (1995). J Mol Graph 13: 142-52, 109-2.
M Suzuki, N Yagi, M Gerstein (1995). Protein Eng 8: 329-38.
M Suzuki, SE Brenner, M Gerstein, N Yagi (1995). Protein Eng 8: 319-28.



1994 (7)

M Gerstein (1994). American Journal of Physics 62: 596-601
M Suzuki, M Gerstein, N Yagi (1994). Nucleic Acids Res 22: 3397-405.
Y Harpaz, M Gerstein, C Chothia (1994). Structure 2: 641-9.
M Gerstein, AM Lesk, C Chothia (1994). Biochemistry 33: 6739-49.
M Suzuki, D Neuhaus, M Gerstein, S Aimoto (1994). Protein Eng 7: 461-70.
M Gerstein, EL Sonnhammer, C Chothia (1994). J Mol Biol 236: 1067-78.
RB Altman, M Gerstein (1994). Proc Int Conf Intell Syst Mol Biol 2: 19-27.



1993 (7)

M Gerstein, R Lynden-Bell (1993). Journal of Physical Chemistry 97: 2982-2991.
M Gerstein, R Lynden-Bell (1993). Journal of Physical Chemistry 97: 2991-2999.
M Gerstein, BF Anderson, GE Norris, EN Baker, AM Lesk, C Chothia (1993). J Mol Biol 234: 357-72.
M Suzuki, M Gerstein, T Johnson (1993). Protein Eng 6: 565-74.
M Gerstein, RM Lynden-Bell (1993). J Mol Biol 230: 641-50.
M Gerstein, G Schulz, C Chothia (1993). J Mol Biol 229: 494-501.
S Subramaniam, M Gerstein, D Oesterhelt, R Henderson (1993). EMBO J 12: 1-8.



1992 (2)

M Gerstein (1992). Acta Crystallographica A48: 271-276.
I De Baere, L Liu, L Moens, J Van Beeumen, C Gielens, J Richelle, C Trotman, J Finch, M Gerstein, M Perutz (1992). Proc Natl Acad Sci U S A 89: 4638-42.



1991 (1)

M Gerstein, C Chothia (1991). J Mol Biol 220: 133-49.



1987 (1)

N Fisch, A Kritz, M Gerstein (1987). Proceedings of the Sixth Joint Workshop on Electron Cyclotron Emission and Electron Cyclotron Resonance Heating. (eds. A Riviere, A Costley), 23-30 (Oxford, 16-17 September).