Gerstein Lab Publications
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[ 2004-summary ]
2004 Publications
[ 2005-Summary ]
2005 Publications
[ 2006-summary ]
2006 Publications
[ 2007-summary ]
2007 Publications
[ 2008-summary ]
2008 Publications
[ 2010-summary ]
2010 Publications
[ best ]
Best Papers
[ best2006 ]
Best from 1997 to 2006
[ best-revs ]
Best Reviews and Other Contributions
[ fav0312 ]
5 Favorites as of March 2012
[ recentpaper ]
Some Highlighted Recent Papers
[ cegs ]
CEGS grant
[ don ]
Dongahue Young Investigator
[ encode ]
Transcriptional and Regulatory Elements in the ENCODE Region
[ encode-pgenes ]
ENCODE Pseudogene
[ forgetppg ]
Molecular Basis of Myelopoiesis
[ hpc ]
High Performance Computing
[ keck ]
Keck Foundation grant
[ mem ]
NIH membranes grant
[ nbc ]
NIH Northeast Biodefense Center
[ nesg ]
NESG grant
[ NIDA ]
Yale/NIDA Neuroproteomics Research Center
[ nih-tn ]
Global Analysis of Transcription Regulatory Networks
[ nsfdbi ]
NSF Database Activities Program
[ nsfg1s ]
Modeling G1/S Transition During Yeast Cell Cycle
[ nsfymd ]
Microarray Database Design
[ onrrec ]
Navy Young Investigator
[ phrma ]
PhRMA grant
[ pilotctr ]
Planning a Biomedical Computing Center of Excellence
[ proteomicsctr ]
Yale/NHLBI Proteomics Center
[ ricearray ]
NSF grant
[ ycemh ]
Yale Center of Excellence in Molecular Hematology
[ encodecore ]
mod/ENCODE "Rollout" publications
[ 1000genomes ]
Papers Related to the 1000 Genomes Pilot Project
[ cancer ]
Cancer
[ epublishing ]
E-publishing and scientific communication
[ expression ]
Analysis of Expression Datasets (including Tiling Arrays)
[ expt-collab ]
Experimental Collaborations
[ interactions ]
Biological Networks
[ interrelate ]
Inter-relating Functional Genomics Features
[ intro-cs ]
Intro. to Lab with a very CS focus
[ intro-to-lab ]
Introduction to the Lab
[ microarray ]
Microarray experiments and analysis
[ mining ]
Systematic Datamining and Biological Database Design
[ motions ]
Macromolecular Motions
[ networks ]
None
[ persgenomics ]
Personal Genomics
[ pseudogenes ]
Pseudogenes
[ regnet ]
Regulatory Networks
[ rnaseq ]
None
[ strgen ]
Structural Genomics
[ student ]
Undergraduate Publications
[ sv ]
Structural Variation
[ tools ]
Lab Software and Web Servers
[ variation ]
Analysis of Human Sequence Variation
[ volumes ]
Macromolecular Packing
[ transcription ]
RNA-seq and Gene Expression Array Analysis
[ ngtools ]
Tools for Processing Next-Generation Sequencing Data
[ formalism ]
Bioinformatics Formalism or Approach but Not as Developed Software Program
[ opinion-review ]
Lists of Opinion and Review Pieces
[ cs-dml ]
Datamining & Machine Learning
[ cs-network ]
Network Analysis
[ cs-other ]
Other
[ cs-semweb ]
Semantic Web and Knowledge Representation
[ encode-nc ]
ENCODE and non-coding annotation
[ CNVpre1KG ]
Paper related to CNV discovery prior to 1000 Genomes Project