Macromolecular Packing [volumes]
- Helix Interaction Tool (HIT): a web-based tool for analysis of helix-helix interactions in proteins.
- AE Burba, U Lehnert, EZ Yu, M Gerstein (2006) Bioinformatics 22: 2735-8.
- The geometry of the ribosomal polypeptide exit tunnel.
- NR Voss, M Gerstein, TA Steitz, PB Moore (2006) J Mol Biol 360: 893-906.
- Calculation of standard atomic volumes for RNA and comparison with proteins: RNA is packed more tightly.
- NR Voss, M Gerstein (2005) J Mol Biol 346: 477-92.
- Calculations of protein volumes: sensitivity analysis and parameter database.
- J Tsai, M Gerstein (2002) Bioinformatics 18: 985-95.
- Determining the minimum number of types necessary to represent the sizes of protein atoms.
- J Tsai, N Voss, M Gerstein (2001) Bioinformatics 17: 949-56.
- Protein Geometry: Distances, Areas, and Volumes
- M Gerstein, F M Richards (2001) International Tables for Crystallography (Volume F, Chapter 22.1.1, pages 531-539; M Rossmann & E Arnold, editors;
Dordrecht: Kluwer).
- The packing density in proteins: standard radii and volumes.
- J Tsai, R Taylor, C Chothia, M Gerstein (1999) J Mol Biol 290: 253-66.
- Packing at the protein-water interface.
- M Gerstein, C Chothia (1996) Proc Natl Acad Sci U S A 93: 10167-72.
- Volume changes on protein folding.
- Y Harpaz, M Gerstein, C Chothia (1994) Structure 2: 641-9.
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