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NSF Database Activities Program [nsfdbi]
Development of a Database of Protein Motions and Associated Tools for Automatic Conformation Comparison
DBI-9723182 (PI M Gerstein)
8/1/97-7/31/01
The goal of this project was to build a database of protein motions.
URL: https://www.fastlane.nsf.gov/servlet/showaward?award=9723182
Articles funded by this grant:
- Tools and databases to analyze protein flexibility; approaches to mapping implied features onto sequences.
- WG Krebs, J Tsai, V Alexandrov, J Junker, R Jansen, M Gerstein (2003) Methods Enzymol 374: 544-84.
- MolMovDB: analysis and visualization of conformational change and structural flexibility.
- N Echols, D Milburn, M Gerstein (2003) Nucleic Acids Res 31: 478-82.
- Calculations of protein volumes: sensitivity analysis and parameter database.
- J Tsai, M Gerstein (2002) Bioinformatics 18: 985-95.
- Normal mode analysis of macromolecular motions in a database framework: developing mode concentration as a useful classifying statistic.
- WG Krebs, V Alexandrov, CA Wilson, N Echols, H Yu, M Gerstein (2002) Proteins 48: 682-95.
- The packing density in proteins: standard radii and volumes.
- J Tsai, R Taylor, C Chothia, M Gerstein (1999) J Mol Biol 290: 253-66.
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