This directory is for the paper titled:

Structural Genomics Analysis: Phylogenetic Patterns of Unique, Shared, and Common
Folds in 20 Genomes
by Hedi Hegyi, Jimmy Lin & Mark Gerstein

All the files are in the following Private web directory:

http://bioinfo.mbb.yale.edu/e-print/foldpat20-proteins/

The full document is located in the file fp-full-document.pdf. The text and the
figures/tables separately are located in fp-text-revised.doc and fp-fig-tables.pdf.
PDFs of the figures and tables are located in the PDF directory and supplementary
files are located in the extra directory. More detailed information of the files in
this directory are below:

Main files:
 fp-full-document.pdf
 fp-fig-tables.pdf
 fp-text-revised.doc
 readme.txt

PDF files (in pdf directory):
 pdf/figure-1a.pdf           
 pdf/figure-1b.pdf           
 pdf/figure-1c.pdf           
 pdf/figure-2a.pdf           
 pdf/figure-2b.pdf           
 pdf/figure-3.pdf            
 pdf/figure-4.pdf            
 pdf/fp-figures.pdf          
 pdf/fp-tables.pdf           
 pdf/fp-text-revised.pdf     
 pdf/table-1a.pdf            
 pdf/table-1b.pdf            
 pdf/table-2.pdf             

Extra files (in extra directory):
 extra/figure-1a.doc           
 extra/figure-1b.xls           
 extra/figure-1c.xls           
 extra/figure-2a.pdf           
 extra/figure-2b.pdf           
 extra/figure-3.xls            
 extra/figure-4.xls            
 extra/fp-ref-report.doc       
 extra/fp-text-revised.doc     
 extra/fp-text-revised.rtf     
 extra/fp-text-revised.txt     
 extra/table-1a.xls            
 extra/table-1b.xls            
 extra/table-2.xls             
 extra/tables-all.xls          

Description:

 fp-full-document.pdf
    The entire paper submitted including text, figures, and tables in PDF Format.

 fp-fig-tables.pdf
    All the figures and tables in the paper in PDF Format.

 fp-text-revised.doc
    The revised version of the text in Word Document Format.

 readme.txt
    This file.

 pdf/figure-1a.pdf           
    Figure 1A in PDF Format.

 pdf/figure-1b.pdf           
    Figure 1B in PDF Format.

 pdf/figure-1c.pdf           
    Figure 1C in PDF Format.

 pdf/figure-2a.pdf           
    Figure 2A in PDF Format.

 pdf/figure-2b.pdf           
    Figure 2A in PDF Format.

 pdf/figure-3.pdf            
    Figure 3 in PDF Format.

 pdf/figure-4.pdf            
    Figure 4 in PDF Format.

 pdf/fp-figures.pdf          
    All the figures in the paper in PDF Format.

 pdf/fp-tables.pdf           
    All the tables in the paper in PDF Format.

 pdf/fp-text-revised.pdf     
    The full text in PDF Format.

 pdf/table-1a.pdf            
    Table 1A in PDF Format.

 pdf/table-1b.pdf            
    Figure 1B in PDF Format.

 pdf/table-2.pdf             
    Figure 2 in PDF Format.

 extra/figure-1a.doc
    Figure 1A in Word Document Format.
	 
 extra/figure-1b.xls
    Figure 1B in Excel Format.

 extra/figure-1c.xls
    Figure 1C in Excel Format.

 extra/figure-2a.pdf
    Figure 2A in PDF Format.

 extra/figure-2b.pdf
    Figure 2B in PDF Format.

 extra/figure-3.xls           
    Figure 3 in Excel Format.

 extra/figure-4.xls            
    Figure 3 in Excel Format.

 extra/fp-ref-report.doc       
    The responses to referee in Word Format.

 extra/fp-text-revised.doc     
    The full revised text in Word Document Format.

 extra/fp-text-revised.rtf     
    The full revised text in Rich Text Format.

 extra/fp-text-revised.txt     
    The full revised text in text format.

 extra/table-1a.xls            
    Table 1A in Excel Format.

 extra/table-1b.xls            
    Table 1B in Excel Format.

 extra/table-2.xls             
    Table 2 in Excel Format.

 extra/tables-all.xls          
    All the tables combined in one Excel file in different sheets.

Everything in the manuscript should be accessible in electronic
form. Please contact me at Mark.Gerstein@yale.edu if there are any
difficulties.